Flagellimonas maritima: HME9304_03276
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Entry
HME9304_03276 CDS
T05505
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spon
Flagellimonas maritima
Pathway
spon03420
Nucleotide excision repair
spon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HME9304_03276 (uvrD)
03430 Mismatch repair
HME9304_03276 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spon03400
]
HME9304_03276 (uvrD)
Enzymes [BR:
spon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HME9304_03276 (uvrD)
DNA repair and recombination proteins [BR:
spon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HME9304_03276 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HME9304_03276 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_11
YLR146W-A
Motif
Other DBs
NCBI-ProteinID:
AWX46244
UniProt:
A0A2Z4LXI6
LinkDB
All DBs
Position
complement(3609068..3611392)
Genome browser
AA seq
774 aa
AA seq
DB search
MNTFLDELNDAQRAPVLHKDGPLMVIAGAGSGKTRVLTYRIAHLMEQGVDSFNILALTFT
NKAAKEMKKRIATIVGNSEAKNLWMGTFHSVFAKLLRFDGDKLGYPSNFTIYDTQDSQRL
IASIIKEMGLDKDIYKYKQIQNRISSYKNSLITVKAYFQNPELVEADAMAKRPRLGEIYQ
NYVDRCFKAGAMDFDDLLLRTNELLTRFPEVLMKYQDRFRYILVDEYQDTNHSQYLIVKA
LSDRYQNICVVGDDAQSIYSFRGANISNILNFQRDYDDVAVYRLEQNYRSTKNIVNAANS
IIAKNKNQLEKVVWTSNGEGQLIKIHRSVTDAEEGRYVAASIFESRMQQQMQNGEFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRIIINPKDEEALKRIINFP
ARGIGQTTIDKLVVAANHYGRSIFEVLEHLDKLNLNINSGTKRKLEDFVTMVKSFQIMNE
GADAFTLAEHVAKKTGLLLEFKKDGTPEGIAKMENIEELLNGIKDFVEGQKELADATGAL
SEFLEDVALATDMDKDVGDDDRVALMTIHLAKGLEFPHVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAVLTYTQNRYRWGKLIDAEPSRFLEEIDEEFVENLTPINDGY
RYKSMIDTNIFGEVDKSKLRQIKPRNGIPPTVHKPNENQLRKLRKLKPELSAPANNTNIV
DSNLAEGSMVNHTRFGKGKVLKIEGAGNDKKAEIQFERGDVKKLLLRFAKLEVL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacttttttggatgaattgaacgatgcacagcgcgctcctgtattgcacaaagat
ggccccttaatggtcattgcgggagcgggatcggggaaaacccgtgtattgacctatagg
atagcacatttgatggagcagggggtggattcattcaatattcttgcgttgacctttacc
aataaggctgccaaagagatgaaaaagcgtatcgccactattgttgggaattcagaagct
aaaaatctatggatgggcactttccattcggtctttgccaagttattgcgctttgatgga
gataaacttgggtaccccagtaactttaccatttacgatacgcaggattcacaacgcctt
attgcatccattatcaaagaaatgggtctggataaggatatttataagtacaagcaaata
cagaacagaatatcctcttataaaaatagcttgattaccgtgaaggcctatttccagaat
ccagaacttgtggaagcggatgccatggcaaaaagaccaagacttggggaaatttatcaa
aactatgttgatcgttgttttaaggcaggggctatggattttgatgatttattgttgcgc
accaatgaattgttgacacgctttccagaagtgctgatgaaataccaagacaggtttcga
tatatccttgtagatgagtaccaagataccaaccactcacaatatttgattgtcaaagca
ctttcggaccgctaccaaaatatttgtgtggtaggtgatgatgcccaaagtatttattcc
tttaggggagccaacattagcaacatccttaattttcaaagggattatgatgatgtggcg
gtatatcgattggaacaaaactatcgttccacaaagaatatcgttaatgcggcgaattct
atcattgcaaagaacaaaaaccaattggaaaaagtggtctggacttccaatggtgaagga
caacttataaaaatccatcgtagtgtcactgatgcggaagaaggaaggtatgtggccgct
tctatctttgagagcaggatgcaacaacaaatgcagaatggtgagtttgccgttctgtat
agaacaaattcacagtcgagagctattgaggatgcgttgcgaaagcgtgatattccatat
agaatctacggtggcctgtccttttatcagcgtaaggaaatcaaggatgtacttgcatat
ttgaggataattatcaatccaaaggatgaggaagcactgaagcgaatcattaatttccct
gcaagaggtataggacaaacaacgattgataaacttgtggttgctgcaaatcattatggg
cgttccatttttgaagttttagagcatttggacaaactcaatttaaacatcaatagtgga
actaaaagaaagcttgaagattttgtgacaatggtcaaaagcttccagattatgaacgag
ggagccgatgcgtttacattggcggaacatgttgcgaagaaaacagggcttttgttggag
ttcaaaaaggatggcactccagagggcattgccaaaatggaaaacattgaagaacttttg
aacggaataaaggattttgttgagggacagaaagaattggcagatgccacgggcgcattg
tcagaattcttggaagatgttgcccttgctacggatatggacaaggatgtaggtgatgat
gaccgagttgccctcatgacaattcacttggcaaaaggattggaatttccacatgtatat
attgtgggaatggaagaggacttgtttccttctgcaatgagcatgaatacgagaagcgaa
ttggaagaggaacgccgcttgttctatgtggcattgactagggcagaaaagcaggcggtt
cttacgtatacgcaaaaccgatatcgttggggaaaactaattgatgcagaacccagtaga
tttctggaagagattgatgaggagtttgttgaaaatcttacgcccataaatgatggctat
cgttacaaatccatgattgacaccaatatttttggtgaagtggacaagagcaaactacgc
cagatcaagcccagaaatggaatacctccgactgtgcataaacccaacgagaatcaattg
cgaaagcttagaaaattaaagccggagctatcagccccagcaaataataccaatatcgtt
gattctaatctagctgaaggttctatggtgaaccatacacgttttggtaaaggaaaggtg
ctaaaaatagaaggtgcagggaacgataaaaaggccgaaatccaatttgagaggggtgat
gtcaaaaaattattgctcagatttgccaaacttgaggtattataa
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