Sporosarcina sp. Te-1: J3U78_00330
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Entry
J3U78_00330 CDS
T08181
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoo03400
]
J3U78_00330
DNA repair and recombination proteins [BR:
spoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J3U78_00330
Archaeal homologous recombinant proteins
J3U78_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
SMC_N
RNA_helicase
GTP_EFTU
ABC_tran
DUF4081
DMSP_lyase
Motif
Other DBs
NCBI-ProteinID:
QTD41357
UniProt:
A0A975H219
LinkDB
All DBs
Position
59117..62194
Genome browser
AA seq
1025 aa
AA seq
DB search
MRPIKLSMTAFGPYKGTEVIDFSELDTHRLFVISGSTGAGKTTIFDGICYALYGQASGED
RTDSRSMRSDFADDTVQTEVELVFEVRGRQYRILRQIPYTKAGNKRETSGRCELVELTQK
GEIPSVDRQIVSEINQKIEALIGFTHAQFSQIIMLPQGEFRKFLTSDTDNKEVILRKIFK
TEPYRHLVERLKGQRDNLKVEWERERLAFDGLIRQIPSIVPHRESLLFRILENEQPNIYQ
IVEGLDDELAYYVHDIVEKQKKYEDAYTRHAEVQTSYHAAKTINQLFDDLEQKEDLAERI
RQKQPILEQKEKLLAQAERAAAIQGVELQYEELKKEWGIQRAASERNKEEAERARIVFRA
AENEKQNIEESRDERERLQIDLTRLQSYLPMVMTLQEKERELHHSKERVESLERKVSSIS
NRLSEKKDNVLQFADKIEKLEIEGADYEEVLDQLNELKTKTRLAFDYEQLRLELETAKRL
SDEQASQFDLAQQDYQRLEQTWLQNQASMLAHTLQDGNPCPVCGSLHHPAKIDGREDHSI
SKDKVESERKRVSELESAYQKQLATYEAIRHQFDDKKRQLESLQVDSTYTELHAIQVGME
KHLNRLRENKSTLVELKRKWKETAGEQERLQAEKEMIEKNLIDEKSVLGKEQARYDQTRE
SIPIEFRDAIILEERIKSLEKTKRELDERFSRIQKKYEESKEYFTKTEAAEQFSKQALQQ
LVLRKEKAEEHFKEVLVESNFATVEDYKRAILSNNEREDLRNAIQDFKQKAHATNEMIRS
LTLQLEGKTKSDLTAIAEMTEELKRQYEQALQGYHASIDCEKSLRQSKEKLVKSSGDLVE
LENKIGKISELYNLLRGQNRMKLSFERFIQIDYLDRIVALANSRLRELSNGQYELIRSDR
QEARGKQSGLGLDIYDAYTGQNRDVKTLSGGEKFNASLCLALGMSDVIQSFQGSVSIETM
FIDEGFGSLDSESLQKAIDALIDLQRSGRMIGVISHVEELKAAFPAILEVKKSKEGYSKT
AFLIK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatcaaactgagcatgaccgcttttggcccgtacaaagggacggaggtcatt
gatttttcggaattggatacccatcgtcttttcgttatttccggatcgacgggggcagga
aagacgacaatttttgacggcatctgctacgccttatatggacaggcgagtggagaagac
aggacggatagccgatctatgcgaagtgattttgcagacgataccgtccaaacagaagta
gagctagtttttgaagtgcgaggccggcaatatcgaattcttcgccaaatcccttatacc
aaagcgggaaataagagggaaacctccggcaggtgtgaattagttgaattgacacaaaaa
ggggagatcccaagcgtcgacaggcaaatcgtttccgaaatcaatcaaaagattgaggcc
ttaattggttttacccatgcgcaatttagtcagattatcatgctgccgcaaggtgaattt
cgcaagtttctcacttccgacacagataataaagaagtcatcctccggaaaatctttaag
acggaaccgtatcggcatcttgtggaacgtctgaaaggacaacgtgataacttgaaagtg
gaatgggagcgtgaacggctggcatttgatggattgattcgacagattccgtcaattgtt
ccacatcgggagtcgctgttattccgtatattggaaaacgaacaacctaacatataccaa
atcgtagaaggcctcgacgatgagctggcgtattatgtccatgacattgttgagaagcag
aagaaatacgaggacgcttatacaagacatgccgaagtacaaacgagctaccacgctgcc
aaaacaatcaaccaactttttgatgacttggaacaaaaggaagatctggctgagaggatt
cgtcaaaagcaaccgatcttggaacagaaagaaaagcttctggcacaggctgaacgtgca
gcagccatccaaggggtcgagcttcagtatgaagaattgaaaaaggaatggggaatacaa
agggcggcgtccgagcgaaacaaggaggaagcggaacgtgcaaggattgtatttagggcc
gctgaaaacgagaaacagaacatagaggaaagtcgggacgaaagagaacggcttcaaata
gatctgactcgattgcaaagttatttgccgatggtcatgacgttacaggagaaggaaagg
gagctccatcactcgaaagagagggtggaatctctggaacgcaaagtgtcgagcatctcg
aaccgactgtccgaaaagaaggacaacgtcttacagtttgccgataaaatcgaaaagttg
gaaattgaaggcgcggattacgaagaagttttggatcaattgaatgaattaaaaaccaaa
actaggttggcttttgactatgaacaacttcgactggagctggaaacggcaaaacggctg
tcagatgaacaggcttctcaattcgacttggcccagcaagattatcaacggcttgaacag
acatggcttcaaaatcaagcatccatgcttgcacataccttgcaggacgggaacccatgc
ccagtatgcggcagccttcatcatcctgccaaaatagatggaagagaagaccattctata
tccaaggacaaagtggaatccgaaagaaaaagagtatcggagttggaaagcgcatatcaa
aagcaactcgctacatatgaggcgattcgtcatcaattcgatgacaagaagagacaactt
gaatccctccaagtcgattcgacatacaccgaacttcatgctattcaagtcggtatggaa
aagcatttgaatcgactacgcgaaaacaaatccacgcttgtcgagttgaaaagaaaatgg
aaagagacagctggcgaacaggagcgcttgcaggccgaaaaagagatgattgagaagaat
ttgatcgatgaaaaatcagttcttggaaaggaacaggcccgttatgatcaaaccagggaa
tcgattccgatagaatttcgcgatgcaatcattctggaagaacggatcaaatcgttagag
aagacgaaacgagagttggatgagcgattttcgagaatacaaaagaagtatgaagagagc
aaagagtactttacgaaaacggaagctgctgaacaattttcaaagcaagctctacagcaa
cttgttctacggaaagaaaaggccgaagaacatttcaaggaagtgcttgtcgagtcgaac
ttcgcaaccgtggaagattataagagagctatcctttcaaataatgaaagggaagacctt
cgaaatgcaattcaggattttaaacagaaggcacatgcgacgaatgagatgatccgctca
cttacattgcaattggaagggaaaacgaagtccgatttgacagcgatcgcagagatgaca
gaagaactgaaacggcaatatgaacaggccttgcaggggtatcacgcttccattgactgc
gaaaagtcccttcgtcaaagcaaggaaaaactagtcaagtcatcaggcgatctagtggaa
ttggagaacaagatcggaaaaataagcgaactttataatttgctccgtggccaaaataga
atgaaactatcatttgagcgcttcatacagattgattatttagatcggattgtggcattg
gccaacagccgtctgcgtgagctttcaaacggccaatatgaattgattcgaagtgaccgg
caggaggcacgcggcaaacaaagcgggcttggtctggatatctatgatgcctatacagga
caaaatagggatgtaaaaacactctctgggggagaaaagttcaatgcttctctctgtctt
gcgctaggaatgtcggatgtcattcaaagtttccaaggctctgtctccattgaaacaatg
tttatcgacgaaggattcggatcgctcgattctgaatcactgcaaaaggcgatcgatgct
ctgattgatcttcaacggtcaggaagaatgattggtgtcatctctcatgtggaggaactg
aaagccgctttccctgctattttagaagtgaagaaatccaaggaagggtatagtaaaacc
gcgtttttaattaagtga
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