Sporosarcina sp. Te-1: J3U78_03505
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Entry
J3U78_03505 CDS
T08181
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo00630
Glyoxylate and dicarboxylate metabolism
spoo00680
Methane metabolism
spoo01100
Metabolic pathways
spoo01120
Microbial metabolism in diverse environments
spoo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J3U78_03505 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
J3U78_03505 (fdhF)
Enzymes [BR:
spoo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
J3U78_03505 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4
NADH-G_4Fe-4S_3
Fer4_6
Fer4_7
Fer4_2
Fer4_8
Fer4_21
Fer4_10
Fer4_9
Fer4_15
Fer4_18
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
QTD41931
UniProt:
A0A975CA60
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All DBs
Position
702732..705665
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AA seq
977 aa
AA seq
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MSIKINDTRYDFDEGMTILQVINQAQLTHPQICYLPEVDPIETCDTCIVEADGRLVRACS
TPAVSGMKVQLASPRAKAAQTEAMDRILENHLLYCTVCDNNNGNCKIHNTVDLMEIEHQK
YPYEPKCSKDSVDLTNPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWERDRPIVLWDG
GAKINDSSCVSCGHCVTVCPCNALMEKSMLGEAGFMTGLTDEILTPMIDLVKDVEPGYSG
IMAISDAEAAMRETRTKKTKTVCTFCGVGCSFEVWTKDRKILKIQPVSEAPVNAISTCVK
GKFGWDFINSEERLTKPLIRRGDTFEEASWEDALNLVAKKLGGIHRKHGRDSVGLISSSK
ITNEENYLMQKLARQVFQTNNVDNCSRYCQSPATDGLFRTVGMGGDAGTIKDIAQAGLVI
IVGANPAEGHPVLATRVKRAHKLHGQKLVVADLRKHEMAERSDIFISPKQGTDQVWLMAV
TKYMIDQGWHDEQFIQDNVLHFEELKEVLHTYTMDFAEHITGVPKEKLIQTAEMIRDADG
TCILWGMGVTQNTGGSDTSAAISNLLLATGNYRRPGAGAYPLRGHNNVQGACDMGTLPGW
LPGYQHVTDGAAREKFERAYGVEIDGKPGLDNIQMLHAVDQGMLKGMYIVGEDMALVDSN
ANHVHDVLSKLDFLVVQDIFFSRTARYADVILPAVPSLEKDGTFTNTERRVQRLYQALPE
LGDAKADWWIMQEIANRLGADWAYRHPSDIFAEMASLSPLFSQADYSVMEDWDSFLWGSL
TGESTPLLYVDGFNFPDKKARFALSDWVEPTQFPAEFDLHINNGRMLEHFHEGNLTNKSD
GIQSKVPEIFVEVSPELAEERGVVSGSTVRLVSPYGALRLPALVTDRVKGNELFLPMNSV
EKESAVNFLTGPAVDQRTNTPAFKQTKVRMEVIRKEGKSPLPASNPRNKKRHPQNGVEVE
RKWARPGYEHLTDGEKG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaagatcaatgataccagatatgatttcgatgaaggtatgacgattcttcaa
gtgatcaaccaggcacagctgacgcatccgcaaatttgttatttaccagaagtggatccg
atcgaaacttgtgatacttgtattgtcgaggctgatggacgacttgtcagagcctgttcg
acgcctgcggtttcagggatgaaagtacaacttgcgtctccgcgggcaaaagcagctcaa
actgaggcaatggatcgtattcttgaaaaccatttgctttattgcacagtgtgcgataac
aacaacggcaactgcaaaatacataacactgtggacttgatggagattgagcatcagaaa
tatccctatgaaccaaagtgctcaaaagacagcgtggacctgacaaacccattctaccgc
tacgatccaaaccagtgtatcgcctgcggccaatgcgtggaagtgtgtcaaaatctacaa
gtgaacgagacgctttccatcgattgggaacgcgacaggccgatcgttttatgggacgga
ggagctaagattaatgattcgtcctgtgtcagttgcgggcattgtgtcacagtttgtcct
tgcaatgcattgatggagaaatccatgttgggcgaagctggtttcatgaccgggctcaca
gatgagatcttgacaccgatgattgacctggtaaaagatgtagagccgggatatagcggc
atcatggcgatctcggatgccgaggcagctatgagggaaactaggacgaaaaagacgaag
acagtttgtacgttttgtggtgtcggctgttcattcgaagtatggacgaaggaccgaaaa
atactgaaaatccaaccggtttctgaggcaccagtcaatgcgatttcgacttgtgtgaaa
ggaaagttcggttgggatttcattaatagcgaagaacgtctgacaaagccgctgatccgt
cgaggcgacacatttgaagaagcgagctgggaggacgcccttaatcttgtggctaaaaaa
ctgggcggcattcatcggaaacatggacgggatagtgtaggtctaatctcgtcttccaaa
atcacaaatgaagaaaactatttgatgcagaagttggcaaggcaagtgttccagaccaat
aatgtggacaattgctcccgttattgccagtccccggcgacggatggccttttccgcaca
gtcggtatgggaggggacgctggcacgataaaggatatcgcccaagcaggacttgtcatt
atcgtcggcgcgaacccggcagaaggccatcctgtcctggctacccgggtgaaacgggca
cataagctgcatgggcaaaagcttgtcgtagcggatttgcgaaagcatgagatggcagaa
cgctcggatattttcataagccctaaacaaggtaccgaccaggtatggctgatggcagtt
acgaaatacatgattgatcagggttggcatgatgagcagtttatccaggacaatgtcctg
cattttgaagaattgaaagaagtgctgcacacctacacgatggatttcgcggaacatatc
acgggggtgccgaaggagaagttgatccagacggcagaaatgatccgggatgctgatgga
acatgtatcttgtgggggatgggtgtcacgcaaaatacgggtggatctgatacatccgcc
gcaatttccaatctgctattggctacaggaaattatcgccgtcctggagcaggtgcttat
ccattgcgcggccataacaacgtgcaaggtgcgtgtgatatgggaacgctgcctggttgg
ctgccgggatatcagcacgtcactgatggcgcggcacgagaaaaatttgagcgggcatat
ggcgtcgagattgatgggaagccaggacttgataatatacaaatgcttcatgccgttgat
caagggatgttgaaagggatgtatattgtcggggaggacatggcacttgtcgattcaaac
gccaatcatgttcatgacgtcctttcgaaattggatttcctcgtcgtccaggacattttc
ttctcacggaccgcccgatacgcggacgttattttaccggccgtcccatcgcttgagaaa
gatggaacatttactaacacggaaagacgagtacaacggttgtatcaggcacttccagag
ctgggcgatgccaaggcggattggtggattatgcaggagatcgcaaaccggctcggagct
gattgggcatacaggcaccctagcgatatcttcgcagaaatggcgagcttatctccttta
ttcagccaagcggattactctgtcatggaggattgggatagtttcttatggggcagctta
actggcgagagcacgccgctcctatatgtagacggattcaacttcccggataaaaaagca
cgttttgccttgtcggattgggttgagccgactcaattcccagcggaattcgacctgcat
atcaataatggccggatgctggaacatttccatgaaggaaatctgacgaataaatcagac
ggtatacaatcgaaagtaccggaaatctttgtggaagtgtcacctgaactggcggaagag
cgtggtgtagtcagcggttcaacagtccgtcttgtttcgccgtacggggcgttgcggctg
cccgctctcgtcacagaccgagtgaaaggaaacgaactgtttctgccaatgaactcggtg
gaaaaggaatctgccgttaatttcttgacagggccggcagtagatcagcgaacgaatacg
ccagcgtttaaacagacaaaagtgcggatggaagttatccggaaagaaggtaagagtcca
ctgcctgcatccaatccgcggaataagaagagacatccgcagaacggggtggaagtggaa
cggaaatgggcaagaccaggctatgaacatctaaccgatggggagaaagggtga
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