Sporosarcina sp. Te-1: J3U78_05920
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Entry
J3U78_05920 CDS
T08181
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spoo03036
]
J3U78_05920 (smc)
Chromosome and associated proteins [BR:
spoo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
J3U78_05920 (smc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
DUF1843
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QTD42353
UniProt:
A0A975C9H6
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Position
complement(1154361..1157921)
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AA seq
1186 aa
AA seq
DB search
MFLKRLEIIGFKSFAERVGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGSK
MEDVIFAGSDSRKPLNFAEVTLILDNSKGLFPLDYSEISVSRRVFRSGESAYLLNGQQCR
LKDINDIFMDSGVGKEAFSIISQGRVDEILNSKPEDRRSIFDEAAGVLKYKTRKRKAEHK
LFETEDNLDRVLDILKELDTRIGPLQKNAEAAEKHLALSEQMRVADVQLLNFDAFQLKNE
IIGKLAELEKLQTQKDGLDNTVRKVEDEVGETKRSLSEKDQLLDVLQKQLVDLSAAAEKW
EGRRLLSLEQQRNAEQHLERITNELSSAQAENEETVKKLEATKEKLQKILAESQLTKKEM
DEISQVLKRSVSETEKEIEELKSSYIERLNEEATIRNDVKHIEERLQGEKLSTDRIVQQT
ALLQERRRQLEEEREVRHSKFHSLNERIETFAQRYKTAVEALRSTEQDLTEQQQLMQTAL
NKQHEMQGRLRALRSLESEFSGFYSGVKEILVARKAGKLSGIDGAVAELVSVAPPYAKAI
EIALGGAMQHIITETEQDARKAIAYLKSKNAGRATFLPRDVMKPRTLPEASLHIAKQHSE
YIGTADSLVSTADAYRVIAANLLGNTIVAKTLAGASAIAKSIGYKYRIVSLDGDVVNAGG
SLTGGGVKGQSSVFSRKAELESLQAHLQKMSKSIEIGTEKISNTKMKVAQQMHDSDSLQK
ELESLQQEKMTVENRLRETMMEIRTVDSEIATSEIGMKGAETVGSELSAKRQQFIQKHQM
VKNELERLQTEIAQLERLASDRRSEEASLLARNSELRERAAVLREQLTFHQTSVADMENN
LADIQRKIDRLTEEQQFLLGKGKGNDYTPEEIESQIEESASAKKSLTSKVDEERAIRARL
AERLLEKEDSLKKLRAESDRLIAMLNDLHVVLSRLEVKYESVTSRLLDEYGLFPDMESIR
ENFDAEEIRLQVNRLKDELEALGAINPSSIQEFKEVSERHQFLTEQRSDLLEAKKTLTEA
MSEMDREMESRFSTTFHAVKSRFHVVFKEMFGGGDADLILTEPENLLETGVEIVARPPGK
KLQSLSLLSGGERALTAIALLFSIIEVRPVPFVILDEVEAALDEANVIRYSKYLKKFSEN
TQFIVITHRKGTMEGADVLYGITMQESGVSKLISVKLSEVPVEAMS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgtttctgaagagattagagattattggatttaagtcgtttgcggaacgagtcggcata
gactttgtacctggcgttacagctgtagttggacctaacggcagcgggaagagcaatgta
acggatgccattcgctgggtgcttggggaacaatcggcaaagtctttgcgtggttcaaaa
atggaagatgtcatttttgctggaagtgattcaaggaaacctcttaattttgctgaggtc
acattgattctcgataatagcaaagggctttttccgcttgattactccgaaatcagtgtg
agtcgaagggtttttcgttcaggagaaagtgcgtatctgttgaacggccaacaatgccgc
ttgaaggatattaatgatatctttatggattcaggtgtcggcaaagaagcgttctctatc
atttcccaaggccgtgtcgatgaaatcctcaatagcaaacctgaggatcgtcgaagtatt
ttcgatgaggcggcaggtgtattgaaatataagacgcgcaagcggaaagcggagcacaag
ctgtttgaaaccgaagacaatttagaccgggtactagatattctcaaggaacttgacact
cgaatcggcccgttgcaaaaaaacgcagaagcggcagagaagcatcttgccctttccgaa
cagatgcgtgtagctgatgtgcaactattaaattttgatgcttttcaattaaaaaacgaa
ataatcggtaaactggcagagctggagaaattacaaactcaaaaggacggtttagacaac
actgtccggaaggttgaagacgaggttggagagacaaagcgcagtctttctgaaaaggat
caactgttggatgtacttcaaaagcaattagtcgatttgagtgcggcagccgaaaaatgg
gaaggccgccgtcttttgtctttggagcagcaacggaatgcggagcagcatttagagcga
attacaaacgaattatcctctgctcaagccgaaaatgaggaaaccgtaaagaaacttgaa
gcgacgaaagaaaaattacagaaaatcctagcagagtcgcaactgacaaaaaaagaaatg
gatgaaatttctcaagttctgaaacgctctgtcagcgagacggaaaaagaaattgaggaa
ttgaaatcgagctatatcgaacggttgaatgaagaagcgacaatccgaaacgatgtgaag
catattgaagaacgattgcagggagaaaaattatcgaccgatcggatcgtacagcaaact
gctttattgcaagaacggcgccgccagttggaagaggagcgggaagtccgtcattcgaag
tttcattctctgaatgagcggatcgagacttttgcacaacgttacaaaacggcggtggaa
gcgctgcgttccacagagcaggatttaacggaacaacagcaattgatgcaaaccgcttta
aataaacaacatgaaatgcaaggcagattgcgggctttgcgcagtctggaatcggagttt
tcaggattctattcgggcgtcaaagaaattttggtcgcgaggaaagctggaaagctgagt
ggaattgacggagctgtggcagaacttgtttcggttgcccctccttatgcaaaagcaatt
gaaatcgcacttgggggcgccatgcagcatatcatcacggagaccgaacaagatgctcgc
aaggcgattgcctatttgaagtcgaaaaatgccggcagagccacctttttgccgagagat
gtcatgaaaccgagaaccctcccggaagcgtctttgcatatcgctaaacagcactcagag
tatattggcaccgcagactccctcgtctcaactgctgatgcctatcgggtcatcgctgcc
aatctccttggaaacacgattgtcgcgaaaacacttgccggcgcttcggcaatcgccaaa
tcaattggctataagtatcgaatcgtctcgctggatggggacgtagtcaatgccggtgga
tcattgacgggcggcggagtgaaaggccaatcttctgtgttttccagaaaagcagaattg
gaatcgcttcaagcccatcttcaaaaaatgtccaagtcaattgagattggaacagaaaaa
attagcaacacgaaaatgaaagtcgctcagcaaatgcacgattcggacagtttacaaaag
gaattggagagccttcaacaagagaagatgaccgtagagaaccgtttgcgcgaaacgatg
atggaaatccgcacggtggattccgaaattgccacatcggaaatcgggatgaagggtgca
gaaacggtcggttccgagctatcggcaaaacgtcaacaatttattcaaaaacatcaaatg
gtcaaaaacgaactggaacgtttgcagactgaaattgcgcaattggaacgattagcatcc
gatcgacgatctgaagaggcctctttgcttgcccggaactccgaattgagagaacgggca
gcggtgctaagagaacaacttactttccatcaaacgtccgtagccgacatggaaaataat
ttggcggacattcaacgaaagatcgatcggttaacagaagaacagcaattccttcttggc
aaaggaaaagggaatgactatacaccagaggaaatagaatcgcagattgaagaatcggcg
tctgccaaaaagtcattaacatctaaggtggatgaggaacgggcgatccgtgcccgcctg
gcggaaagactgttggagaaagaggattcgctcaagaaactgcgagctgaatcggatagg
cttatcgccatgttgaacgatctccatgttgtcctctccagactagaggtgaaatacgaa
tcggtcacaagcaggctgttggacgagtatggcttattccctgatatggaatcgatccgg
gagaattttgacgcagaagagattcgtttacaggtcaacaggctgaaagatgaattggag
gcgttgggagcgatcaacccgagctccattcaggaattcaaagaagtatcggaaagacat
caatttctgacggaacaacggagcgatttgctggaagcgaagaagacattgaccgaggca
atgtccgaaatggatcgagaaatggaaagccggttttcgactactttccatgccgtgaaa
agccgttttcatgttgtttttaaagaaatgttcggaggcggagacgcagatttgatcctc
accgaaccggagaatcttttggagacgggtgttgagatagtcgcgcggccgccaggaaag
aaattgcagagtttaagcttgctttcaggtggggagcgtgctttgactgccattgcattg
ctgttctccatcatcgaagtaagacctgttccatttgtcattttggatgaagtggaagct
gcactcgacgaagcgaatgtaataaggtacagtaaatatttgaagaagttttccgaaaac
acacagttcattgtcatcactcaccggaaagggacgatggagggggcggatgtcctttat
ggtattaccatgcaggaatcgggcgtatccaaactgatttcggtaaagctttcggaggtt
ccagttgaagcgatgagttga
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