Sporosarcina sp. Te-1: J3U78_06225
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Entry
J3U78_06225 CDS
T08181
Name
(GenBank) PASTA domain-containing protein
KO
K08724
penicillin-binding protein 2B
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo00550
Peptidoglycan biosynthesis
spoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J3U78_06225
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spoo01011
]
J3U78_06225
Peptidoglycan biosynthesis and degradation proteins [BR:
spoo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J3U78_06225
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
QTD42406
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All DBs
Position
complement(1215927..1218110)
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AA seq
727 aa
AA seq
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MFVVFGGLFFLLMARFLSIQITGQAEGRPLAAMAASKYARENVLKAERGEIVDRNGELIA
SDTLSYRLFAVISEQATPKGSKTLYHVVDYDKTAEVLSHYIPMSKEEIQSRMQTAANKEK
VPWQIEFGKAGNGINHETMEKIQKAMKKEGLTGVNFMEEKKRFYPNGNFASYLIGFAMRE
EQKDGSYLTVGKMGLEKTYDKELTGVDGKVDFQTDFWGFILPKSNKVVSPPQNGNEIHLT
LDKTIQNFVEDAMTRVEKEYSPKKMLVIVANPKTGEIYAMSQRPSFHPGTREGLTENWLN
EAVETTIEPGSTMKMFTLAAAIEENKWDPAAKYNSGQYKIYDRIIRDHNRVGWGPITFLE
GFQRSSNVSMAYLLERLGDRKFIEYLEKFGFGEKVGIDLPHEAPGYILDSYPSERLTTSY
GQGSTVTPIQMIQAATAIANDGVMMKPYVIDEIINPNTDEIVQNHKSEEKGRPISKETAK
KVREILASTVTSEVGTGRKFALPGYDVGGKTGTAEIPDSRGKYLSGDGNYLYSFLGMAPI
DDPQLVTYVLVQQPQLELGEIGSDPVSKVFKPVMESSLKYLNILPENVDKTESFKLKDYI
GKDSKTVMDGLGEKGIRPVLIGEGGEIAAQYPSEGTKLTKDALVLLRTAGKTRLPDFTGW
SKKMVLSFKQQSGLDIRLNGDGFVTEQSLSPGTVVNESDPLVIMLQPPKEQYEKPEVEDE
EEQIIGG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagtttttggagggctcttttttctattaatggctcgatttctgtccattcaa
attacgggacaggctgaaggaagaccacttgcggcgatggctgcatctaaatacgcgaga
gaaaatgtattgaaagctgaacgcggtgagattgtagaccgcaacggagagttgatcgca
tcggatacgttaagttatcggctgttcgctgttatcagtgaacaggccacaccaaagggg
tccaaaacgctttatcatgtggtggattatgataaaacagcagaagtgttgagtcactat
atcccgatgtctaaggaagagattcagagcagaatgcaaaccgcggccaataaggagaag
gttccttggcagatcgaattcggaaaagcgggaaatgggatcaatcacgaaacgatggaa
aaaatccaaaaagcgatgaagaaggaaggactcaccggagtcaacttcatggaagagaaa
aagcggttctatccaaatggcaattttgcctcctatttaattggttttgcaatgcgggag
gaacaaaaagatggttcataccttaccgtcggtaaaatgggactggaaaagacgtacgat
aaagaactgaccggagtcgatggaaaggtggattttcagacggacttttggggcttcata
cttccaaaaagcaataaagtcgtctccccgcctcaaaacgggaatgaaattcacctaacg
cttgataaaacgattcaaaacttcgtggaagatgccatgacgcgtgtggagaaagagtat
tctccgaaaaagatgcttgtcatcgtagcaaatccgaaaacgggtgagatctatgcaatg
agccaacggccatccttccatccggggacgagagaaggattgacggagaactggttaaac
gaagctgtagaaacgacaatcgaaccaggatctacgatgaaaatgttcacattggccgcc
gcaatcgaagaaaataaatgggatcctgctgcaaaatacaactcaggacaatataagatc
tatgatcgcattatccgtgaccataatcgtgtaggatggggtccaatcacatttttggaa
ggattccaacgttcttcaaacgtctccatggcatacttgctggaacgtttaggtgaccgc
aagttcatcgagtacttggagaagttcggatttggggaaaaggtcggcatcgatctgccg
catgaagcaccgggctatatcttagatagctatccttccgaacggttgaccacgtcttac
ggtcaaggttccacagtcacgccaatccagatgattcaagcggctacagccatcgcaaat
gatggtgttatgatgaagccgtatgtcatagatgaaattatcaatccaaatacggacgaa
attgtccaaaatcataaatcggaagaaaaaggacgtccgatttccaaggagactgctaag
aaagtgcgggaaattctggcatccactgtgacttccgaggtagggacgggaaggaaattt
gcccttcctggatatgatgtaggtggtaaaacgggaacggcagaaattccggactcccgt
ggaaaatatttatcaggtgatggaaattacttatactcattcctaggtatggcgccgatt
gatgatccgcagttagtgacgtacgttcttgttcagcagccgcagctggaactcggggaa
atcggatcagacccggtgtcaaaagtttttaagcctgttatggaaagcagtttaaagtat
ttgaatatccttcctgaaaatgtagataagaccgaatccttcaagttgaaggattatata
ggaaaagattcgaaaacagtcatggatggattaggagagaaagggattcgtccagttctc
attggcgaaggtggggagattgcggcccaatacccaagtgaagggacaaagttgaccaag
gatgcattagttttgctgagaacagccggcaaaacacggttgcctgatttcacgggttgg
tcgaaaaaaatggttctttctttcaaacagcaatcaggactcgatattcgattaaatggt
gatggttttgtcacagagcagagtctgtctcctggtacggtagtaaatgaaagtgatcca
ttggttatcatgttgcagccgccgaaagaacagtatgaaaagccagaagtggaagatgaa
gaggaacagattattggaggttga
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