Sporosarcina sp. Te-1: J3U78_06815
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Entry
J3U78_06815 CDS
T08181
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24072
positive control factor
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoo03021
]
J3U78_06815
Transcription machinery [BR:
spoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J3U78_06815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_10
GerE
HTH_38
HTH_40
HTH_36
HTH_11
UPF0122
HTH_24
HTH_23
HTH_29
HTH_5
HTH_28
HTH_AsnC-type
Phage_CI_repr
DUF6362
HTH_1
HTH_22
Sigma70_ECF
MarR_2
DUF2774
HTH_Tnp_ISL3
HTH_IclR
TrmB
HTH_17
HTH_6
HTH_50
DUF1804
Phage_terminase
HTH_30
HTH_AraC
HTH_20
HTH_31
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QTD42515
UniProt:
A0A975C9V9
LinkDB
All DBs
Position
complement(1340029..1340538)
Genome browser
AA seq
169 aa
AA seq
DB search
MPSWDDELIHEYRQSRRGLSKMKSKLNPKNPMDTKDLEHINSMIGDMTEAIDWLETGKDP
KVFRGVHVNAVYHVRSYENMDLIPDIERELREDNNINKKHLFMTSKEKMILSEILSSFSN
RERRCYLLHVSHKKSFAEIANELGVSRSTVQTHITRAKNKVRQRFQEVG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
ttgccaagttgggatgacgaactaattcatgagtacaggcaaagtaggagggggctgtca
aagatgaaaagcaaactgaacccgaaaaatccaatggatacaaaagatttagagcatatt
aacagcatgatcggtgacatgactgaggctatagattggcttgaaacagggaaagacccg
aaagtatttagaggtgtgcacgtgaatgctgtctaccatgttcgctcatatgaaaacatg
gacctgattccagatatcgaacgagaattgagggaagacaacaacatcaataaaaaacat
ctcttcatgacctcaaaagaaaagatgattttatcagaaatattatcctcgttctcgaat
cgagaaaggagatgttacttgcttcatgttagccataaaaaaagctttgctgaaatcgcg
aacgagctaggtgtcagtcgtagcactgttcaaacgcatattacacgggctaaaaacaaa
gttagacaaaggtttcaggaagtcggttaa
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