Sporosarcina sp. Te-1: J3U78_06875
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Entry
J3U78_06875 CDS
T08181
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J3U78_06875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spoo03000
]
J3U78_06875
Transcription factors [BR:
spoo03000
]
Prokaryotic type
Helix-turn-helix
Other families
J3U78_06875
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_1
HTH_3
TPR_2
TPR_6
TPR_7
HTH_19
HTH_31
RPN7
Motif
Other DBs
NCBI-ProteinID:
QTD42526
UniProt:
A0A975H0X4
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Position
complement(1349397..1350626)
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AA seq
409 aa
AA seq
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MGIGSKIRYLRSKSNLTQKELALGVCDTSYLSKIENDIVVPSDEMLGLFCLKLGLETTDL
KQEVDLLRDLQLNATDLHRTIRKGSIESAIVLYNDIIAKSRMNISPAMQVFKVLFGLRIA
LMKKEREEAVELYQETIKLQEYVLEWMKPYYNRYSGLFHYMYGSLKKSLFLYKEAEKHVP
VDEIEDVYYQLALVHHLLGEYSMSTYYEEKALELFARKMDYEQCVNCQLLLGINYRKMGN
LEQAKETYLSILEKVVPLRNREVIAKVYHNLGLVYSDEGKSSEAIMAFETSLGYRDDDNA
RMKTCYTISKEFLRIGDGASAAECVKVGGKIAESVKDEEHMIKFQVIKYKLDKKKQNPIL
EYYITTVALPYFEERSDHQMIKEYIHELVLYYEECRQYKSALAYLKKLL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcggttcaaaaattaggtatctccgttccaaaagcaatctaacacaaaaagag
ttggctttaggagtgtgtgatacttcctatctgagcaagatagaaaatgatattgtagtg
ccgagcgatgaaatgctgggtctcttctgtttaaagcttgggttggaaacgacagattta
aagcaggaggtggatcttcttcgtgatctgcaattaaatgcaacagatcttcatcggaca
attcgaaaagggagcattgagagtgcaatcgtcttatataacgatattattgcgaagagt
cgaatgaatatcagtcctgcaatgcaagtgtttaaagtcttgtttggattgcggattgca
ttaatgaagaaagagcgtgaggaagcggtcgaactttatcaggagacaatcaagctacag
gagtatgtactagaatggatgaaaccatattacaatcggtatagcggtctttttcattac
atgtatggcagtctaaaaaagtcactctttctatacaaagaagccgaaaaacatgtgcct
gtagatgaaattgaggatgtgtattatcagcttgcactcgtgcatcatcttttgggtgaa
tactccatgtcgacctattatgaagaaaaagccttggaactctttgctcgaaagatggat
tatgagcaatgcgtgaattgccagcttcttctaggaatcaactatcgaaaaatggggaac
ttggaacaagcaaaagagacttatcttagcatcctagagaaagttgtcccgttacggaac
cgggaagtcatcgcaaaagtttaccataacttagggctagtctattccgatgaaggtaag
tcttcggaagcgattatggcctttgaaacaagcttaggttatcgtgacgacgacaacgca
cgaatgaaaacttgttataccatttctaaagagtttctgcgaattggcgatggagcgagt
gcagccgagtgcgtaaaagtcggcgggaagattgcggaaagcgtaaaagacgaggaacat
atgattaagtttcaagttatcaagtataaacttgataagaaaaaacaaaacccgattttg
gaatattatattaccacggtagcattgccatatttcgaagagcgttctgaccatcaaatg
atcaaggaatatatccatgaattggttttgtactacgaagaatgtcgccagtataaatca
gctctcgcttatctaaaaaaattattataa
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