Sporosarcina sp. Te-1: J3U78_08770
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Entry
J3U78_08770 CDS
T08181
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoo03019
]
J3U78_08770 (yhaM)
Messenger RNA biogenesis [BR:
spoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J3U78_08770 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QTD42837
LinkDB
All DBs
Position
complement(1706002..1706940)
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AA seq
312 aa
AA seq
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MKKILEHQVGEPVELFLLIKQSVKGITQQGSPFMTLILQDKSGDIEAKLWDTGEEQEKMY
AAATIVKVGGEIHEYRGKNQLRIKSIRPAKEEEGISISDLVPSASRSKEVLFEELLQFFF
EMKNPHIQRITRHLLKKHQTDFMVYPAATKNHHDYVSGLLDHVVSMLNLGKAIAELYPTL
NKDLLYAGIILHDIGKVVELSGPIATQYTVEGNLLGHITIMVNEISKAADELGIEGEEVT
LLQHMVLSHHGKEEWGSPKRPMLKEAEILHYIDNIDAKMNMLNRAMAKTAPGEFTERIFP
LDNRSFYKPSFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattagagcatcaagtcggtgaaccggttgagctttttctactaatcaaa
caatccgtgaaagggattacgcagcaaggcagtccattcatgacattgattcttcaagac
aaaagtggagatattgaagcaaagctatgggacacaggagaagagcaggaaaaaatgtac
gcggctgccacgattgtaaaagtgggcggtgaaatacatgagtaccggggcaaaaaccag
ttgcgaattaaaagcatccgtccggcaaaagaggaggaaggcatctccatttcggacctc
gtgccttctgcttccagaagcaaggaagtattatttgaggagctccttcaatttttcttt
gagatgaagaatcctcatatccagcggattacacggcatttattgaaaaaacaccaaacg
gatttcatggtatatccagcggctacaaaaaatcatcatgattatgtatcgggcttactc
gaccatgttgtgtctatgctgaatttgggaaaagcgatcgcagaactttatccgaccttg
aacaaggacttgttatatgcagggatcatcttgcatgatatcggaaaagtggtcgagctg
tcgggacctatcgcgactcagtacaccgtggaagggaatttgcttggccatataaccatc
atggtaaatgaaatttctaaagcagcagatgaattaggaattgaaggcgaagaggtcacc
ttgctgcagcatatggtcctctcccatcatgggaaggaagagtggggcagcccgaaacgg
ccgatgctgaaagaagcggaaatcctacactatattgataacattgatgcgaaaatgaat
atgttgaaccgggctatggccaagacggctccaggggaatttacagagcggatttttccg
ttggataatcgttctttctataaaccttcatttgaataa
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