Sporosarcina sp. Te-1: J3U78_08890
Help
Entry
J3U78_08890 CDS
T08181
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J3U78_08890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spoo02000
]
J3U78_08890
Transporters [BR:
spoo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J3U78_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
MMR_HSR1
AAA_15
DUF4271
AAA_29
AAA_10
AAA_23
Dynamin_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
QTD42858
UniProt:
A0A975H0J5
LinkDB
All DBs
Position
complement(1727879..1729630)
Genome browser
AA seq
583 aa
AA seq
DB search
MGTGKRLLHYALHYKKLLITGLALLAFAVGADLMGPMIAKKIIDDHIATSVDDAINFTPI
AKLLAVFFGLAVVTAILRYFQYLLLQQAANRIIQKLRNELYAHIQRLPIRYFDNLPAGKV
VARITNDTEAIRNLYVTVVSQFAISGMYMLGIFIALFYLDPKMGAITLFVLPVLYIWMKA
YRKFASKVNHIIRSKNSEMNAMINESINGMTIIQAFRREKQMDQEFNDINEEHYSYQSKL
LKVEAATSHNLVDIIRSLAFVFLIWYFGGASLTAGSVVSVGMLYAFVDYITRLFNPITGI
VNQFARLEQSLVAADRVFDLMDRDGEPVSDEKIARYRGNVRFEDVWFAYKDEEYVLKDIS
FQAKQGETVALVGHTGSGKSSIMNLLFRFYDVSKGRITIDGKDIGQIPRQTIRDHMGIVL
QDPYLFSGTVESNISLGDPRISREKVQQSLDAVGGERVLKHLPGGIDEPVVEKGSTLSSG
QRQLISFARALAFDPAILILDEATSNIDTETEEIIQHAMDVLKKGRTTFIIAHRLSTIKN
ADRILVLDRGEIVEQGTHDELLELGGQYSQMYKLQAGNGAKVG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaggaaaacgtttattgcattatgcattgcattataaaaaacttcttattaca
ggattagcgctgttggcattcgcagttggagctgacttgatgggtccgatgatcgccaaa
aagatcattgatgaccacattgcgacatcggtggatgatgcgatcaatttcactccgatc
gccaagctgcttgccgtcttcttcggattggcggtagtgacagcaattttgcgatatttc
cagtacttgctgttgcagcaggcggcaaaccgcattatccaaaaactgaggaatgagctg
tatgctcatattcagagacttccaatccggtacttcgataatttgccggcagggaaggta
gttgcaaggattacaaacgacacagaagcaatccgtaacttgtatgtgactgttgtgtca
caattcgcgattagcggcatgtatatgcttggaattttcatcgcgctcttttatttggat
ccgaagatgggagcgatcacactgttcgttttgcctgtcctctatatttggatgaaggcc
tatcggaagttcgcttcaaaggtgaaccacattatccgaagcaagaacagtgagatgaac
gcgatgattaatgaatccatcaacgggatgacaatcattcaggcattccgcagagaaaag
cagatggatcaggagttcaacgacatcaatgaagaacattacagctaccaaagcaagctg
ttgaaagtggaggcggcaacgtcccataacctcgtcgatattattcgttcgctcgctttc
gtgttcctcatctggtattttggcggggcttccttgactgcaggaagtgttgtatctgtc
gggatgctctatgcgttcgtcgattatattactcgcttatttaatccaatcacaggtatc
gtcaatcagttcgcccgtttggagcagtcgcttgtcgctgcggaccgtgtctttgatttg
atggatcgggatggggagccggtgagtgacgagaagatcgcccgctaccgtgggaatgtc
cggtttgaggatgtttggtttgcgtataaagacgaggaatatgtcctcaaggatatttca
tttcaagcgaaacaaggcgaaacggtggcgctggtcggccataccggttctggaaagagt
tcgatcatgaacttgctcttccgcttctatgatgtatcgaaggggcggatcacgattgac
ggcaaggatatcggccagattccgcgtcagacgatccgcgatcatatggggattgttctg
caagatccttatttattcagcggaacggtcgagtcgaacatcagccttggggaccctcgc
atttcccgggaaaaggtccagcaatcccttgatgcagttggcggcgaacgcgtgctgaaa
catttgccgggtggtattgatgaaccggttgtcgagaaaggaagcacactttcttcagga
caacggcaattgatttcatttgcgcgtgcattagccttcgatccagccatccttattttg
gatgaagcgacttcgaatatcgatacggaaacagaagagatcatccagcatgcgatggat
gtgttgaaaaagggacgtacgacattcatcatcgcgcaccgtttatcgacaattaaaaac
gcggatcggatccttgtattggaccgcggggaaatcgtggagcaagggacgcatgatgaa
ctattagagctcggcggccaatattctcaaatgtataaactgcaggcaggcaatggcgcg
aaggtaggataa
DBGET
integrated database retrieval system
