Sporosarcina sp. Te-1: J3U78_11865
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Entry
J3U78_11865 CDS
T08181
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spoo03012
]
J3U78_11865 (abc-f)
Translation factors [BR:
spoo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
J3U78_11865 (abc-f)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
MMR_HSR1
RsgA_GTPase
NB-ARC
AAA_23
AAA_22
NACHT
AAA_24
Dynamin_N
AAA_14
nSTAND_NTPase5
AAA
nSTAND3
RuvB_N
AAA_28
AAA_15
TsaE
AAA_16
AAA_18
AAA_30
AAA_33
Roc
ATP-synt_ab
ATPase_2
YPEB_PepSY1-2
DUF87
HHO5_N
PCRF
Motif
Other DBs
NCBI-ProteinID:
QTD39559
LinkDB
All DBs
Position
2315165..2317099
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AA seq
644 aa
AA seq
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MIILQVNGLTKSFSGTDILNNVRLEVQHRDRVALVGRNGAGKSTLLKIIAGEMSADSGDI
IIPKGVRIGYLEQHAGIDSERTIWDEMMTVYEPLRNLESRLRELERQMADPAVYENSLDY
ERVMKEYDALQIEFKDSGGYQYESDCRSVLHGMRFYSEDYEKSVHLLSGGQKTRLALAKM
LLSKPDLLILDEPTNHLDIETLGWLEKYLVSYEGAILIVSHDRYFLDQIVTVVYEVSRRK
VTKYTGNYSAYLDEKAKNYERDQKLYEREATERAKLEDFIQRNIARASTSKMAKSRRKQL
ERTEWMDAPEGNEKSANFSFDIERQSGNDVLALQDVSIGYDSHPVSRHINLHVYKEDRIA
IIGPNGIGKSTLLKTIVKKQPPLNGEIRYGTNVQFGYYDQNQATIIGTGTVLQEIWDEWP
LLNEKDVRSLLGRFLFSGEDVEKPVTSLSGGEKARLSLAKLMLEKSNTLILDEPTNHLDL
DSKEVLENALDDFPGTIVFVSHDRYFINRLATKVIDIGEDGATEYLGDYDYFLEKKAEQT
ELLADGPAAISPVERNPGSRNELDKELKRQERKLSRAIEDAEKKMASLDEEIAHLQEELL
MPEFADDHVKLMDLQAQIDARQEEHDLLAEQWVEWQEELESLYA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgatcattttacaagtaaatggactgaccaagtccttttctggaaccgatatattgaac
aacgtccggctggaagtacagcatcgggatcgagtagcgctagtaggccgaaatggcgcc
ggcaagtcgactctcctgaaaataattgctggagagatgagcgcggattcgggtgatatt
atcattccaaaaggcgtacgtatcggttatttggagcagcatgcgggaattgattcggaa
cggaccatctgggatgaaatgatgaccgtctatgaaccgctgcggaacttggaaagtcga
ctgcgagaacttgaaaggcagatggcggatccggctgtttatgaaaacagcctggactat
gaacgggtcatgaaggaatatgacgcactgcaaattgaattcaaggattcaggcggttat
caatacgagtctgattgccggtccgtacttcatggaatgcgtttttattcggaagactat
gagaaaagcgtccatctcctttcaggggggcaaaaaacgagacttgctctggctaaaatg
ctcctcagcaagccagatctgctgatcctcgatgagccgacaaaccatctggacatcgag
acgctcggatggttggaaaagtatttagtttcgtatgaaggcgcgattctaatcgtgtcc
catgaccgatattttctggatcagattgtaacagtcgtctacgaagtatcccgaagaaaa
gtgacgaaatataccgggaactacagtgcctacttggatgaaaaggcgaagaattatgag
cgggaccagaagttatacgagcgggaagcgaccgaacgggcaaaactggaggatttcatc
cagcgcaatattgcccgagcatctacatccaaaatggcgaaaagccggcgcaagcaattg
gaacgcaccgagtggatggacgcgccagaagggaatgagaagtctgccaatttctcattc
gatattgaacggcagagcggcaacgatgtgctagccttgcaggacgtatcgatcggctat
gacagtcatccagtgtctcgccatattaacttgcacgtctacaaagaggatcggattgcc
attatcggtcctaatgggatcgggaaatccacgctgttaaaaacaattgttaaaaaacag
ccgccgttaaatggggagatccgctatggaacgaatgtccaattcggttattacgaccag
aaccaagcgaccatcataggtactggcaccgtcctgcaggaaatttgggacgaatggcct
ctgttaaacgaaaaagatgtccgctccttgcttggccggttcctattctcaggggaggac
gtggaaaagcctgtcacttccctatctgggggtgaaaaggccagattatccctcgctaag
ctgatgctcgaaaaatccaatacacttatattggacgagccgacgaaccacttggacttg
gacagcaaggaagtgctggaaaacgcattggatgatttcccagggaccatcgttttcgtc
tcgcacgaccgttatttcattaaccgactcgctacaaaggtgattgacattggtgaggat
ggggcgacagagtatctcggcgactatgattactttctggaaaagaaagcggagcagacg
gaactgcttgcggacgggcccgcagccatatctcctgttgagcgaaacccgggtagccgc
aatgagttagataaagaattaaagcggcaagaacgcaagctgagtagggccatagaagat
gcagagaaaaagatggcttctttagacgaggagatcgctcatttgcaagaggaactgctg
atgccggagtttgcggacgatcatgtaaagctgatggacttgcaagcacagattgatgcg
cgccaggaggaacatgacctgctggctgagcaatgggttgaatggcaagaagaactagaa
tctctttatgcataa
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