Sporosarcina sp. Te-1: J3U78_13270
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Entry
J3U78_13270 CDS
T08181
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo03420
Nucleotide excision repair
spoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J3U78_13270
03430 Mismatch repair
J3U78_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoo03400
]
J3U78_13270
Enzymes [BR:
spoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3U78_13270
DNA repair and recombination proteins [BR:
spoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J3U78_13270
MMR (mismatch excision repair)
Other MMR factors
J3U78_13270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
Viral_helicase1
DEAD
SLFN-g3_helicase
AAA_16
AAA_30
PipX
NACHT
nSTAND3
TMF_DNA_bd
ResIII
Motif
Other DBs
NCBI-ProteinID:
QTD39799
UniProt:
A0A975GXM1
LinkDB
All DBs
Position
2569922..2572258
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AA seq
778 aa
AA seq
DB search
MRSNFEQEQQRVNDVMAVIQKQIHRLEKETSQRREEVVNIRRHFWDEVKVNTDSFDDYLE
TIIGLRQEAQALSVSQSTHRQASKKLSTLRRMQEAPYFGRIDFLEDEISTEEQIYIGIST
LMNESGEDFLIYDWRAPVSSVYYDYQPGIAHYSTPGGMIRGKLMKKWQYLIRGGVLQSMF
DTSLTIGDEILQQVLGKGTDKQMHNIVATIQQEQNRIIRHDHGKLLIVHGAAGSGKTSAA
LQRIAYLLYKYRDSIKADQIILFSPNTMFNHYVSNVLPELGEENMQQVTFQEYLDYRLGK
LFQVENPYDQLEYVLIAENTSCYRARVAGIRFKASTPFFEGIEAYRKALETAGMVFKGIS
FKGEPIVTAEQMAHQFYHHNTELRFHNRLEKLKDWLLQKIIEFQKTERSKPWVLEEIELL
SNDEYNKARMLLAKKHGVKRDMMADFEVDPRELAQLIVRQRMKSLRKQVQSYDFIHMREI
YKQLFRNPLDIEQWVQGDLIEEWPSICQATLTTIDKGTLLYEDATPFLLLHELILGFQSN
RTIKHIVVDEAQDYSPFQFEYLRCLFPAAKMTVLGDFNQAIFAHARERVDFQMLSGLYGP
EQTEVVQLARSYRSTKPIIEFTRRLVPNAEKIIPFDRDGEQPVLTRLGDTSELHRHITSK
VAELQSLGLQSIAIICKSAAEGQHAYEALSSIENIKFLKKGTMEYEQGVVVIPSYLAKGI
EFDAVIIYNASEQVYSDESLRRIFYTACTRAMHFLHLYSVGEPTSLLQHVPKEYYNTL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaaattttgagcaggagcaacaaagagtaaatgatgtgatggcggtcattcag
aagcagatccaccgtttggagaaagaaacttctcagcgccgagaagaagtcgtgaacatc
cgaagacatttttgggatgaggttaaagtgaatacggattcgttcgatgattatctcgaa
actattatcggtttgcggcaagaagcccaggctctatctgtcagccaaagcactcatcga
caagcttccaaaaaattatccacacttcgccgcatgcaggaagccccctacttcggccga
attgatttcctagaggacgagatttcaactgaggagcaaatctatattggaatatccacc
ctcatgaatgaaagcggagaagatttcctcatatacgactggcgggcacccgtttccagc
gtttattacgattatcaacccggcattgcccattattcaacaccaggaggcatgattcgc
ggaaaactgatgaagaagtggcagtatctcattcgaggtggtgttcttcaatctatgttc
gacaccagcctcacaattggagacgaaatcctgcagcaagtattaggaaaaggcaccgac
aaacaaatgcataatattgtcgccaccattcaacaagagcaaaaccgaatcatccgccat
gaccatggaaaactgctcatcgttcatggagcggcgggcagcggcaaaacttccgcggcc
ctccagcgaatcgcttatctgctttataaatatcgcgacagtatcaaagcggatcaaatc
atcctgttctcaccgaatacgatgttcaaccattatgtgtcgaatgtacttccggagctt
ggtgaagaaaatatgcagcaggtcacatttcaggaatacttggactatcggctcggaaaa
ctatttcaagttgaaaatccctatgatcaattggaatatgttttgattgccgaaaacacc
tcttgttacagagcaagggtggcgggcatccgttttaaagcctccacgccattctttgaa
gggattgaagcttatcgcaaagctttggagacagcagggatggtgtttaaggggatttca
ttcaaaggcgagccgattgttaccgctgagcaaatggcgcaccagttttatcatcacaat
accgaactccgcttccacaatcgacttgaaaaactgaaggattggcttttgcagaagatc
attgaattccaaaaaacagagcgctcgaagccatgggtactagaggaaattgaattgctt
agcaatgacgagtacaacaaggcacgcatgctgctagcgaaaaagcatggcgtaaaaaga
gacatgatggccgattttgaggtggatcctagagaattggcccaactgattgttaggcag
cggatgaaatcacttcgaaaacaagttcaatcatatgattttattcacatgagggagata
tataagcaactgttccgaaatccactggatattgaacaatgggtacaaggcgatctgata
gaggaatggccatccatctgccaagcgacccttacaacgattgacaaaggaacattgctg
tatgaagatgccacgccattcttgctgttacatgagctgatcctcggttttcagtcgaac
cggaccatcaaacatattgtcgtagatgaagcgcaggattattctccgtttcaatttgag
tatttgaggtgcctgtttcctgccgcaaagatgacagtccttggcgactttaaccaggcc
atttttgcacacgcaagagaacgggttgactttcaaatgctgagcggactatacggaccg
gaacaaacagaagtcgtccaattggcaagaagctatcgttccacgaaaccgattatcgaa
ttcacacgaagactcgtaccgaacgccgagaaaattatccctttcgaccgggacggcgag
cagccagttttgacacgattgggagatacctcggagctgcaccgccatattacttcgaaa
gttgcagagctgcaaagtctcggcttgcagagtatcgcaatcatttgtaaatctgctgcg
gaaggtcagcatgcctatgaggcattatcgagcattgagaatatcaaattcctaaaaaag
ggaacgatggaatatgaacaaggcgtcgtcgtcatcccttcttatttggcaaagggtatc
gagttcgacgctgttatcatctataatgcatccgaacaggtttacagcgatgaaagcctc
cgaagaattttttatactgcttgcacaagggccatgcattttttacatttatacagtgtc
ggagagccgacttcgttgctgcaacatgttccgaaagaatattacaatacactttaa
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integrated database retrieval system
