Sporosarcina sp. Te-1: J3U78_13350
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Entry
J3U78_13350 CDS
T08181
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spoo03016
]
J3U78_13350 (truA)
Enzymes [BR:
spoo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
J3U78_13350 (truA)
Transfer RNA biogenesis [BR:
spoo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J3U78_13350 (truA)
Prokaryotic type
J3U78_13350 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Hira
Motif
Other DBs
NCBI-ProteinID:
QTD39814
UniProt:
A0A975GXM5
LinkDB
All DBs
Position
complement(2591462..2592208)
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AA seq
248 aa
AA seq
DB search
MKRVKAVISYDGTNFAGYQFQPKMRTVQSEIDKGLRKLHKDSSIFSVASGRTDAGVHALG
QVIHFDTPLDLSLERWKMALNVYLPKDIRAEAVEFVDDDFHARYSATGKTYMFKWSKSEV
HSPFERNYSVHLGKWNPDIGLMREAAKYFMGTHDFTSFCSTKTATASKVRTIRMLTLEEQ
GEELIMTVEGDGFLYNMVRTIAGMLLAVGIGWNEPADIQAILEAKDRKKAGKTAPAHGLY
LVHVTYDK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtcaaagctgtcatttcctacgacggaacgaattttgctggctatcaattc
cagccgaagatgcgcacggtgcaatcggaaatcgataaaggactacggaagctccataag
gattcttccatcttttcagtagcgagcggacggacagatgcaggcgtgcatgcgcttgga
caagttattcattttgacacgccgctcgatctatcgctggaacgctggaaaatggcgctc
aatgtgtatttgccgaaagacatccgggccgaggctgtggagttcgtcgatgatgatttc
catgcgcgttattcagctacaggaaagacctatatgttcaagtggtcaaaaagtgaagtc
catagtccgtttgagcgaaattattctgttcatttagggaaatggaatccagacatcggc
ctgatgcgggaagcagcaaagtatttcatgggaacgcatgactttacaagtttttgctct
accaaaacagcaaccgccagtaaagtgcggaccattcgcatgctgacccttgaagagcag
ggtgaggaattgatcatgacagtcgaaggcgacggatttttatacaatatggtgagaacc
atcgcagggatgctcctcgctgtcggaatcggctggaacgagccagccgacatccaggcg
atcttggaggcgaaagaccgtaaaaaggcaggtaaaaccgcgccagctcacggtttatac
cttgttcacgtgacatatgacaagtga
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