Sporosarcina sp. Te-1: J3U78_13705
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Entry
J3U78_13705 CDS
T08181
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoo03400
]
J3U78_13705
Enzymes [BR:
spoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J3U78_13705
DNA repair and recombination proteins [BR:
spoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J3U78_13705
Prokaryotic type
J3U78_13705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QTD39883
LinkDB
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Position
complement(2651933..2653375)
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AA seq
480 aa
AA seq
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MTTTIVWFRKDLRLHDHPALYEAASNGKVVSVFIWTPEDEKVYGGSEPSLWWLHHSLKEF
EHRLNGLGIQLVIRKGDSLQILAELAQEIQADGVYFNERFEPEHRAKDEETVAMLRLLDL
DVQIFRGNLLFNPYTLKNSKGDPFKVFTAYWKRSLEEFVPPPLPAPDLQGIESECSSMTV
EALGFPSQRDWADCFQEIWNPGEQSAIGKWEDFMEEGLLYYGAERDLFAGESSAVSMLSP
SIAAGDISVRSMWHSAKRVGDASVLPAVQNSTISFLRQLAWRDFAYYQLLWFPHFVDQPL
LTYFTHFPWNGTVEQLERWEQGKTGYPLVDAGMRELKTTGVIHNRVRMVVASFLVKHLLI
PWTEGSDWFRKSLIDYDMANNAMGWQWVAGTGIDAAPYFRIFNPTAQSEKFDPNGDYIRQ
WVPELADLPAPHIHKPWETPPALLREANVQLDLTYPRPIIDHKMARKRALQAYNELRKKD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacaattgtatggttccgcaaagacttgagactgcatgatcacccggccttg
tatgaagctgcatccaacggaaaagttgtttctgtgtttatctggaccccggaggatgaa
aaggtatacggcggaagtgaaccttcgttatggtggcttcatcattcattgaaagagttt
gaacaccggctaaatggtctcggcatccaattggtgatccgcaagggtgacagcttgcag
attctggctgagctcgcccaggagattcaggcagacggggtttattttaatgagcgtttt
gaaccggagcaccgggcaaaagatgaagagacggttgcgatgcttcggttgctcgatttg
gatgtgcagatattcagaggaaatctgttgtttaatccgtatactctaaaaaattctaag
ggagacccctttaaagtgtttacggcgtattggaaaaggagcttggaagaatttgtgccg
ccgcctcttccggctcctgatttgcaagggatagagtcggaatgctcctccatgacagtg
gaagcgttaggctttccatcgcaacgggattgggcagactgttttcaggagatctggaat
ccaggtgaacaaagtgcaattggtaaatgggaagactttatggaagaaggcttgctgtat
tatggcgcggaacgtgatctgtttgcaggggaatcgtctgctgtctctatgctttccccc
tctattgcggcaggtgatattagcgtgaggtcaatgtggcactctgcaaaacgggtcgga
gatgcttccgtgcttcctgctgttcaaaattccaccatttcctttctgcgacaattggcg
tggcgtgattttgcttactatcagctcctctggtttccccattttgtcgatcaaccgcta
ttgacttacttcactcactttccttggaacgggacagtggaacagttggagagatgggaa
caagggaaaacgggatatcccctcgtagatgcaggcatgcgagaattaaagacaactggc
gtcattcataatcgggtccgcatggtggtggcttcttttcttgtaaaacatttgctcatc
ccttggacggaaggctccgattggttccggaaatccctaatcgattacgacatggccaat
aacgcaatgggatggcaatgggtagcgggaacgggtatcgatgctgcaccgtatttccgg
atctttaatccaactgctcaaagtgagaaatttgatccaaatggagattatatccggcaa
tgggttccggaattggcggatctgcctgcgcctcacatccacaaaccatgggaaactcct
ccagccttgttaagagaagcgaatgttcagctggatcttacgtatccaagaccgatcatc
gaccataagatggcgcgaaaacgtgcattgcaagcatataacgaattacggaaaaaagac
taa
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