Sporosarcina sp. Te-1: J3U78_17915
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Entry
J3U78_17915 CDS
T08181
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24072
positive control factor
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoo03021
]
J3U78_17915
Transcription machinery [BR:
spoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J3U78_17915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
HTH_23
HTH_40
Terminase_5
HTH_29
HTH_10
SRP_SPB
HTH_36
UPF0122
HTH_11
HTH_24
KcnmB2_inactiv
Sigma70_ECF
DUF6179
HTH_Cmi2_C
MarR_2
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QTD40617
UniProt:
A0A975C751
LinkDB
All DBs
Position
3462709..3463209
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AA seq
166 aa
AA seq
DB search
MSGWADELIQEYMVGQLELTKHADRLDKNNPYDKNDLTQINSMIDSMAFSIEWMATGRQP
GTYRGAEKRAIYQKQYISSMDVIPDITEQLEEDHKHLFISKEERMILADIFASMSHRERQ
CYVLHEGQGMSMGRIADELGLKKRTVQQYIERARDKVKEKVDEKAS
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtgggcagatgaactaattcaggagtatatggtgggacagctagaactaacc
aagcatgccgataggttggataagaataatccttacgataagaatgatttgacacaaatc
aatagcatgattgatagcatggctttttcaatcgaatggatggctactggccggcaaccc
gggacctaccgtggagcagagaagagggctatttatcaaaaacaatatatttcaagtatg
gacgttattcctgatataacggagcagctggaggaagaccataaacatctgtttatcagc
aaggaagagagaatgattttggccgatattttcgcatcaatgtcgcatcgtgaaaggcaa
tgttatgtccttcatgaaggacaaggaatgagcatgggaaggattgctgatgaactgggt
ttgaagaagagaacagtgcagcagtacatcgagcgggcgagagataaggtcaaagaaaag
gtggacgaaaaagcttcatga
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