Sporosarcina sp. Te-1: J3U78_18050
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Entry
J3U78_18050 CDS
T08181
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K24072
positive control factor
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoo03021
]
J3U78_18050
Transcription machinery [BR:
spoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J3U78_18050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
HTH_10
MarR_2
HTH_38
HTH_24
Sigma70_r4
UPF0122
HTH_28
HTH_11
HTH_40
HTH_23
HTH_29
HTH_5
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QTD40642
UniProt:
A0A975C9P4
LinkDB
All DBs
Position
3483479..3483988
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AA seq
169 aa
AA seq
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MFSWLDTLLDEYISNRVALNKMKESLNTNNPESESDLKLINSMIASMTESIEWMQLGKDP
KVYRGVHEKAVYQKRSYENIDLIPDIAEQLDSESSNEKHLFMSKEEKVIMADILSSFSLR
ERQCYLLHVAHNKSMGDIALELGISKGTVQTHINRAKKKVDEIMSSKAS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttggttagataccttattagacgaatatatatcaaaccgagtggcgctcaac
aagatgaaagaatccttaaacaccaataaccctgagagcgagagtgatttaaaattgatt
aatagcatgattgcaagtatgacggagtcgattgagtggatgcaactggggaaagatcca
aaagtttatcgtggagtacatgaaaaagcggtttatcaaaaacgatcttacgaaaatatt
gatttaattccggatattgccgaacagttggatagtgaaagtagtaacgaaaaacaccta
ttcatgtcaaaagaagaaaaagtaattatggccgacatcctttcctcattctctttaagg
gagcggcaatgctatctccttcatgtggcacataacaaaagcatgggagatatagcgtta
gaacttggcattagtaaagggaccgtacaaacacatattaatcgggcaaagaaaaaagtc
gatgaaataatgagctcgaaagcatcatga
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