Sporosarcina sp. Te-1: J3U78_21210
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Entry
J3U78_21210 CDS
T08181
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoo03400
]
J3U78_21210 (addB)
Enzymes [BR:
spoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3U78_21210 (addB)
DNA repair and recombination proteins [BR:
spoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J3U78_21210 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_22
NitrOD5
AAA_19
AAA_30
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QTD41208
UniProt:
A0A975GYY8
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All DBs
Position
4187432..4190923
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AA seq
1163 aa
AA seq
DB search
MSLRFITGRAGTGKTTFIEREIASALQADPLGPAIILLVPDQMSYSMEHSLSVNFGLRGI
IRAQVSTFKRLAWRILQETGGITRKEVDGFGYRMLVRSVLEENQDELRLFRQAANKKGFV
EKVGDLMKEFSRYCLDRQCLTDLGSNLEMSNAPRTLQDKVHDLTLLFTKIEERLGTSYVD
SEGHLALLASQIKHSDLLQEADIYIDGFENFTAREYEILTELMKHAKRVTVVLPMESDLS
GHADHELFFNPVRTALRLREIARTESVEVEENIHLEKALRFHNEELRFFESAFERYPMPS
RPSEGCITLIEAADRRAEVHAVARKIREMVMEGERYKEISVLYRQPEVYDELIETIFGQY
DIPVFISRKKPMLHHPLIEFTRSVLEAVLANWSYETVFRAVKTDLFFPHGEDKFLWRERA
DRLENYVLANGINGSRWFDETRWVVKRYRGLEKFTQVQTDEELAQQQELHLMRDLIREPL
AQFEARLKRARNGREVAESLFTFMESLRVYDKIIDLRMEEERAGRLLGATEHEQAWDNWI
NVLDQFVLMFGDRQLDPKEAVRILDEGFDTLEFTRIPPSLDQVTVTTIELASLMEIDAGF
VIGVNDGVLPKRIDAEGLLSDADREWFAKNGLELAPTAKMKLMDEAYMAYRAFTASRDRL
FISYPIADEEGKSLLPSLYIPRIEQLLPGIEKKLAVTDPTELLSDMDQMEYVSHPRAALP
YLSMKLKEADHSGVLEPEWGAVKAYYDEDPLWSSVLTVIIKPLSDQKQTERLAPELTEGL
YGRSFVSSVSRVESYYSCPFKHFASYGLELNERMEFQLEAPSIGDLFHAALKWISDEVIR
TGLSWTELSREQCWQLARTAMEEITPRFFNQILLSTSRYHYIRRKLTHILQRTIYALTKQ
ATSSVFRPVAIEAAFGPGEQLPPLEIPLRRGNKMNLCGRIDRVDATEIDGKNFVRVVDYK
SSAQNLDLTDVYYGISLQMLTYLDVAVENAAEWIGLKADPAGVLYLHIHNPMIKTELELT
EDLIEQELLKSFRMRGYLLEDPEVVRGMDALIGKSSSIVPAALKTDGSFTKASKVLGSED
LDIVRHYVRKRHQLAGDGMLAGDTRVYPYKLKDRMPCQYCSYRSVCQFDPTDPDSTYRNY
ENLDAEQSLERMRKEVMDDEHTR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcgattcattacaggtagagcgggaaccgggaagacgacgttcatcgagcgg
gagattgcgtctgcgctgcaagcagatccgcttgggccggcgattatcctccttgttccg
gatcaaatgtcgtattccatggagcatagtctgtctgttaattttggacttcgtggcatc
attcgggcccaagtgtccacattcaaacggctggcttggcggattttgcaggaaaccggc
gggatcacgcggaaagaggtcgatggcttcgggtaccggatgctggtgcgaagcgtgctg
gaagagaaccaggatgagctgagattgttccggcaagccgcgaataaaaaaggattcgtg
gaaaaagtcggagatctgatgaaagaattcagccgatattgccttgatcgccaatgtttg
acagacctcggatccaatctggagatgtcgaatgcaccgaggaccttgcaggataaggtc
catgatttgacgctgctgttcacaaagatcgaggaacggctcggcacttcctatgtggat
agcgagggccatttggcacttctcgcttcgcaaatcaaacattcggatcttctgcaagag
gcagatatttatatagacgggttcgagaacttcactgcccgtgaatacgagattttgacg
gaattgatgaaacatgccaaacgggtgacggtggtgctgccgatggaatcggatttgagc
ggtcatgccgatcacgaactgtttttcaatccagtgaggacagcgctccgacttcgggaa
atcgcgagaacggaatccgtcgaggtggaagagaacatccatttggagaaagctcttcgt
tttcacaatgaggaacttcgtttctttgagtcggcattcgagcgctatccgatgccatcc
cggccttcggaagggtgcatcaccttgattgaggcagcggatcgacgagccgaagttcat
gcggttgcccggaaaattagagagatggtcatggagggtgaacggtacaaagagatttcc
gtgttgtatcggcagcctgaagtgtacgacgaattgattgaaacgatattcggccaatat
gatattccggttttcattagccggaaaaagccgatgctccaccatccgttaatcgaattc
acccgttccgtcctggaggcggtgctcgccaattggtcgtatgaaaccgtttttcgcgcg
gtaaagacagatctgttttttccgcatggcgaggacaagtttttatggcgggaacgggcg
gatcggcttgaaaattatgtattggccaatggcattaatggttcacgctggtttgatgag
acccgctgggtagtgaaacggtaccggggattggaaaagtttacgcaagtccaaacagac
gaggagcttgcccagcaacaggagctccatttgatgcgtgatttgattcgtgaaccgctt
gcgcagtttgaggcccgcttgaaacgtgcacgaaacggccgggaagtggcggaatcgctc
tttaccttcatggaaagtttgcgagtttacgataaaatcatcgacctgcggatggaagag
gagcgtgctggcagattactcggggccacggaacacgagcaagcatgggataactggatc
aatgtgctcgatcaatttgtcctcatgttcggcgatcggcagttagacccgaaggaagca
gtccgcattctagacgaaggattcgacacattggagttcacccggattcccccttcgctc
gaccaagtgactgtgacgacgatcgagctggcaagtttgatggaaatcgatgccggattt
gtcatcggggtgaatgacggcgtgttgccgaagcggattgacgcggaaggcctcctttcc
gatgctgaccgggaatggtttgcgaaaaatgggctggagcttgcgccgactgccaagatg
aagctgatggatgaagcgtacatggcgtaccgggctttcactgcgtcgagggatcggttg
ttcatttcctatccgattgcggatgaagaagggaaatcattgcttccttccttatacatc
ccccgaattgaacagctgctgcccgggatagagaagaagctcgctgtcactgacccgaca
gaattgctgtcggatatggatcaaatggaatacgtgagtcatccaagggccgcgcttccc
tacttgtcaatgaaattgaaggaagcggatcattcgggagtattggaaccggaatgggga
gccgtcaaggcatattacgacgaggaccctctttggtcttctgtcctgacggtcatcata
aaaccgcttagcgatcagaaacagacagagcggctggctcctgagcttacggaagggctg
tatggacgttcgttcgtttccagcgtctctcgtgttgaatcgtattacagctgtccgttc
aagcatttcgcttcgtacgggttggagctgaatgaacggatggaattccaattggaagct
ccgtcgatcggcgatctattccatgcggcattgaaatggatttcggacgaggtgatccgg
acaggcctgtcgtggaccgaactctcaagagagcaatgctggcaattggcaagaacggcg
atggaggaaattacaccgcgctttttcaatcaaatcctattgtccacaagtcgctatcat
tatatccggcggaagctcacgcatattttgcagcggacaatctacgctttgacaaagcag
gcgacgtcgagcgttttccgtcctgtcgcaatcgaagcggcatttgggccgggcgagcag
ctgccgccgcttgagatcccgttaagacggggcaataagatgaatttatgcgggcggatc
gaccgggtggatgcgactgaaatcgatggaaagaattttgtccgggtcgtcgattataaa
tcgtctgctcagaatttagatttgaccgatgtctattacggcatttccttgcagatgctg
acctacttagatgtggcggttgaaaatgccgcggaatggattgggctaaaagccgatcca
gcaggcgtcctctatttgcatatccataacccgatgatcaagacggagctggagctgaca
gaggatttaattgaacaggaactgctgaaatcgttccggatgcgcgggtatttgctggaa
gacccggaagtggtgcgagggatggacgccctgattggcaagtcatcctcgattgtgccg
gctgcattgaaaacggatgggagctttaccaaagcatccaaagtgctcggttcagaagat
ctggacatcgtccggcactacgttcgaaagcggcatcagctggcgggggacggcatgctt
gccggggatacgcgtgtgtatccttataagctcaaggatcggatgccgtgtcaatattgc
tcataccgctccgtctgccagtttgacccgactgaccctgattccacgtaccgaaactat
gaaaacttggatgcggagcaatcccttgaaagaatgcggaaggaagtgatggatgatgaa
catacccgttaa
DBGET
integrated database retrieval system
