Sporosarcina sp. P37: SporoP37_00045
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Entry
SporoP37_00045 CDS
T04826
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spop
Sporosarcina sp. P37
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spop03019
]
SporoP37_00045
03009 Ribosome biogenesis [BR:
spop03009
]
SporoP37_00045
Enzymes [BR:
spop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SporoP37_00045
Messenger RNA biogenesis [BR:
spop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SporoP37_00045
Ribosome biogenesis [BR:
spop03009
]
Prokaryotic type
rRNA helicases
SporoP37_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
AAA_19
DUF6824
Motif
Other DBs
NCBI-ProteinID:
ARK23232
UniProt:
A0A7U5JUY5
LinkDB
All DBs
Position
7245..8540
Genome browser
AA seq
431 aa
AA seq
DB search
MSKFTDYQFKPFLREAIQKLGFEEPTPIQKEIIPLIMKNTSAIGQAHTGTGKSHSFLIPL
VEKLNTELDELQTVITAPTRELAVQLHDELKKLIEGTDIKSAILIGGTDKKRSAERLKST
PHIIVGTPGRIQDLSETGALPIHTATQLVIDEADLAFDMGFIEDIDKFASRMPEKLSIYV
FSATIPEKLKPFLAKYMNSPVHIQMGDKKPLTENMHYSLVPVRSMDKNKKLLHVMDAIQP
YLAIIFTNTKQNADRLANFLAEHGHKPGKIHGDLTPRERTRVMKKVRDLDYQYIVATDLA
ARGIDIPGVSHVINYELPEDLEFFIHRVGRTARAGMEGNAITLYEPADEDAINQIEKLGI
PFVHEDVKNGEWIQVKERQARKKRVREADEIDKKAASIIRKPDKVKPGYKKKLAEQQENF
KKRQRRMKKKS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatttacagattaccaattcaagccatttttgagggaagctattcaaaagtta
gggtttgaagaaccgacaccaatacaaaaagaaatcatcccattgattatgaaaaataca
agtgcgattggacaggcccatacaggtacagggaagtcccacagttttttaattccgctg
gttgaaaagctcaacacggagctggatgaactgcagactgtcatcacggcgccgacgcgt
gaattggctgttcagcttcacgatgaactgaaaaaactgattgagggaacggatattaag
agtgcgatactgattggcgggaccgataaaaaacgctctgctgaacgtctgaagagcaca
ccgcatatcattgtcggcaccccgggacgtatccaggatttgtctgaaacaggcgcactg
ccaatccatacagctacacagcttgtcattgatgaagcggatctggcattcgacatgggc
tttattgaagacattgataaatttgcgtccagaatgcctgaaaagctcagcatttatgta
ttctcagcaacgattcctgagaaattaaaacctttcttggcaaaatatatgaattcacct
gttcatatacagatgggggataaaaagccgctgacggagaatatgcattattcattagtt
ccggtcagaagtatggataaaaataaaaagctgcttcacgtaatggatgcaattcagccg
tatcttgcaatcatcttcacgaatacaaaacaaaatgcggatcgtctggccaacttcttg
gcggaacatggccataaaccaggtaaaatacacggagatctgacaccgcgtgaacgcaca
cgcgtgatgaagaaagttcgtgatctggattatcagtacatcgtggcgacagatttggcg
gcaagagggattgatattccgggtgtcagccatgtgattaactatgaactgccggaagat
ctggaattcttcatccaccgggtgggccgcaccgcacgcgctggcatggaaggcaatgca
ataaccttatatgaacccgctgatgaagatgcgatcaaccagattgaaaagcttggtatt
ccatttgtccatgaagatgttaaaaatggtgaatggatccaagtgaaagagcgccaggca
cgtaagaaacgtgtgcgcgaagcagatgaaattgataaaaaggctgcttctataattcgt
aaaccagacaaagtaaagccagggtataagaaaaaactggcagagcagcaagaaaacttc
aagaaaagacaaaggagaatgaaaaagaaatcatga
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