Sporosarcina sp. P37: SporoP37_03680
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Entry
SporoP37_03680 CDS
T04826
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spop
Sporosarcina sp. P37
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spop03016
]
SporoP37_03680
Enzymes [BR:
spop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SporoP37_03680
Transfer RNA biogenesis [BR:
spop03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SporoP37_03680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ARK23887
LinkDB
All DBs
Position
701796..702419
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AA seq
207 aa
AA seq
DB search
MLIILSFQAYFSECKGNYSLGGELELAQHYFIGISISHPIHGVVRQLRSEYQLHDKYKVL
PHEKDLHMTMRYIGELDEAKISWLTSSLRKISQSHTSFTVYVKGLSFFGSSTGPRVVYLS
VQSSSALCDLQSQIARRTEKILELERDDRFVPHITIAKKRKTKEKMQLEKKLIDPVPVLI
EEFTLFRIHPNEQPSYEEFARFPLKKS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgttaattattttatcattccaggcatatttttctgaatgtaagggaaactattcatta
ggaggtgagctggaattggcacaacattattttatcggcatctctatctctcatccgatt
cacggggttgtcaggcaattacgcagcgaataccaactgcatgacaaatacaaagtactt
ccccacgaaaaagatttgcacatgaccatgcgctatattggggaactcgatgaagccaaa
atatcatggctaacgtcttccttgcgtaaaatttcacagtctcatacatcctttacagtg
tatgtcaaaggactatcatttttcggatcatctaccggaccgcgcgtcgtctatttatct
gttcaatcctccagcgcactttgcgatttacaatcacagattgcaaggcggacggaaaag
atactcgagctggaaagagatgaccggttcgttccgcatattacgatagcgaaaaaacga
aagactaaagaaaagatgcagttagaaaaaaagctcattgacccagtgcctgtgttaata
gaagaatttacgttattcaggattcacccaaatgaacagccttcctatgaagagttcgcc
cgttttccattaaaaaagagctga
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