Sporosarcina sp. P37: SporoP37_05405
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Entry
SporoP37_05405 CDS
T04826
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
spop
Sporosarcina sp. P37
Pathway
spop03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SporoP37_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spop03400
]
SporoP37_05405
DNA repair and recombination proteins [BR:
spop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SporoP37_05405
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SporoP37_05405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_22
nSTAND3
AAA_25
DnaJ_CXXCXGXG
AAA_18
NACHT
NB-ARC
MeaB
cobW
Viral_helicase1
MMR_HSR1
PRK
Septin
NTPase_1
RPOC_hybrid
DUF87
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ARK24175
LinkDB
All DBs
Position
complement(1025570..1028443)
Genome browser
AA seq
957 aa
AA seq
DB search
MKNKELIIQGARANNLRDITVKIPRDQLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGKP
HCPYHGIEISTQTIQQMVDRVMELPERTRIQILAPIISERKGTHAKLFEDIKRQGYVRVR
VNGETIDLDDNIDLDKNKKHTIEIVIDRIVMKEGVETRLSDSLESALRLADGNVLVDVIG
EEELFFSEHHACPICGFSIGELEPRMFSFNSPFGACPECDGLGMKLEVDPDLVIPNSDLS
LKEHAVAPWEPTSSQYYPELLKTVAKHYKIPMDVPVSELADSDLEKLLKGSSKEKIRFRY
TNEFGNTRDSDIYFEGVLRNVERRYHETSSDYIREQMSKYMTERACPSCTGYRLKPESLS
VLVDGQHIGKITERSIVETTKFFDQLKLSEKDAQIADMILKEIQERLGFLVNVGLDYLNL
SRSAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIGTLQNMRDIGNT
LIVVEHDEDTMMAADYLIDVGPGAGVAGGEIVAAGTPAKVMKNKKSLTGQYLSGKKFIPL
PIERRPRDERSIVVKGASENNLKHIDAEFPLGQFIAVTGVSGSGKSTLVNDILHRTLAQK
LNRSKQKPGKYDSISGVEHLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAMTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVQYKG
KNIADVLEMTVETAAVFFENIPKISRKLQTIVDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHKRSTGKSFYILDEPTTGLHVHDIAKLLEVLQRLVDGGNTVLVIEHNLDVIKTVDHII
DIGPEGGDKGGEIIAVGTPEEVAEVPASYTGKYLRTILERDRHRMKEQIEKAGKSRK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaagaattgataatacaaggagcgagagcgaataacctgagagacattacc
gtcaaaataccccgggaccaattagttgtactcaccggtttatcggggtcagggaagtct
tcattggcttttgatacgatctacgcggaaggacagcgccgctacgtagagtcgttgtct
gcatatgcccgccagttccttggacagatggataagccggatgtggattccattgaagga
ctgtctccggcgatttccatcgaccagaaaactaccagtaaaaatccgcgttcgacagta
ggaacggtgacggagatttatgactacttgcgcctgctgtatgcaagagtggggaaaccg
cattgtccgtatcacggcatagaaatctccacacagacaattcagcagatggtggaccgt
gtgatggaattgccggagcgtacgagaattcaaattttggcgcctatcatttccgaacgt
aaagggacgcatgcgaagctgtttgaagatattaaaagacaggggtatgtgcgtgtgcgg
gtcaatggtgaaacgattgaccttgacgacaatatcgacctggataaaaacaagaagcac
acaattgaaattgtcattgaccggatcgtcatgaaagaaggcgttgagacacggctcagt
gactcgcttgaatccgctttgcggctcgctgacggtaatgttctggtggacgtaatcggg
gaagaggaactgtttttcagtgagcaccatgcatgtccgatctgcggattctccatcggg
gaactggaaccccgcatgttttcattcaacagtccgttcggagcatgtccagagtgtgac
gggctcggcatgaaacttgaagtcgatccggacctggtcattccgaacagtgacctgtca
ttaaaggagcatgcagtcgccccatgggaaccgacaagttctcaatattatccggaactg
ttaaagaccgttgcgaagcattataaaattccgatggatgtgccggtcagtgaactggct
gattcggatctggagaagttattaaaaggttcaagcaaagagaaaatccggttccgctac
accaatgaattcggcaatacacgtgacagtgatatttattttgaaggagttttacgcaac
gtagagcgccgttatcatgaaacatcgtctgattatatccgtgagcagatgagcaaatat
atgaccgagcgggcctgtccttcctgtacaggataccgtttgaagcctgagtctctttcg
gtgctggttgacggacagcatatcggtaaaataactgaacgctcaattgtcgagacgacg
aagttctttgaccaattaaagctgtctgagaaagacgcgcaaattgctgacatgattctg
aaagaaattcaggaacggctgggcttcctggtgaacgtcggactggactacttgaacctg
tcccgttctgcaggcacattgtccggcggggaagcgcagcgtatccgtctggccacacaa
atcggctcccgtttgacaggtgttctttatattttggatgaaccgtcaatcggactgcat
cagcgcgataatgaccggctgataggaaccctgcaaaacatgcgcgatattggcaataca
ctgattgtggtggaacatgatgaagatacgatgatggcggctgactatttaattgacgta
ggccctggtgcaggcgtggcgggcggtgaaatagttgctgcaggcacaccggccaaggtg
atgaagaataagaaatcattgactggacaatatttaagcggcaagaaattcattccgctt
ccaattgaacgcagaccgcgagatgagcgcagcatagtagtcaaaggcgcttcagaaaac
aacctgaaacatattgatgcggagttcccgctcgggcagtttatcgctgtgacaggtgtt
tcgggttcgggtaaaagtacactcgtcaatgatatcctgcatagaacattggcgcagaaa
ctgaaccgttccaaacagaagcccgggaaatacgacagcatcagcggggttgagcatctg
gaaaaagtaatcgatattgaccagtcaccgatcggccggactccgcggtcaaatcccgcc
acgtatacaggcgtctttgatgatatccgcgatgtcttcgcgatgaccaatgaagcaaaa
gtccgcggctataaaaaaggacgtttcagctttaacgtaaaaggcggccgctgtgaagca
tgccgtggggatggaatcattaaaatcgaaatgcatttccttcctgacgtctatgtgccg
tgcgaagtatgtcacggcaaacgttataaccgcgaaacacttgaagtgcaatataaagga
aagaatattgcggacgtgctggagatgacagttgaaacagcggcagtgtttttcgagaat
atcccgaaaatcagccgtaaactgcaaacgattgtcgatgtggggctaggctatataaaa
ttaggccagcctgcgactacgctgtcgggcggtgaagcacagcgggtcaagcttgcttcc
gagctgcataaacgttcgaccggcaagtcgttttatatactggatgagccgacgacaggg
ctgcatgttcatgacatcgccaagttactcgaagtacttcagcgccttgttgatggagga
aataccgttctcgtcatcgaacataatttggatgtaattaaaacggttgatcacattatc
gatattggacctgaaggcggagataagggcggagaaatcatcgcagtcggcacaccggaa
gaagtggcagaagtaccagcctcttatacaggaaagtatttacgcacgatactggagaga
gaccggcaccggatgaaagaacaaatcgaaaaagcgggaaaaagcagaaaatga
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