Sporosarcina sp. P37: SporoP37_06695
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Entry
SporoP37_06695 CDS
T04826
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
spop
Sporosarcina sp. P37
Pathway
spop02020
Two-component system
spop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SporoP37_06695
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SporoP37_06695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spop03021
]
SporoP37_06695
Transcription machinery [BR:
spop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SporoP37_06695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PLK4_bind_CEP152
HTH_IclR
LIM_bind
HTH_Crp_2
MarR
Motif
Other DBs
NCBI-ProteinID:
ARK24384
LinkDB
All DBs
Position
complement(1278836..1280116)
Genome browser
AA seq
426 aa
AA seq
DB search
MEMVLRQKQELGLHMTTELRQAIELLQLCTYDLEQYIREQELENPLIELTEPKLDHSFEE
RITRSYASSESDSQEWVKQDEEGKRDQLIQQINVNFPDEKTKQFLKRLIHSLDDNGYLSA
EMQSVTGVEKGIELLQQIGPPGIGARNLRECLLLQARQSEDCPEFAETFIADYLPLVADR
KWQDIARGMNITMPHVKELYDFLLTLNPRPCPELANTKTEFMVPDVIVEEKQGKLTFHLN
DQELPKISLRKEYVSSLKGKSELSNYLQGYHKQAQWLLTSIEQRRTTMIRIVTDLLEKQQ
TFFRQGREALQPMTLKDIADSIEMHESTISRAVSNKVIQTPAGTFEMRSLFTSKLAAQNG
ESVSQSSVKAALKALVADEDKRKPLSDQKIADFFLKEQGVTISRRTISKYREELQIPPSS
KRKSIL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtccttcggcaaaagcaggagttgggtctgcacatgacaacagagcttcgc
caggctattgagttgctgcaattatgcacatatgacttggaacaatatattcgggagcag
gaactggaaaatcctcttattgaattaacagagccaaaactagatcattcatttgaggaa
cggatcacccgatcgtatgccagttcagaatctgattcacaagaatgggtgaagcaggat
gaagaggggaaacgtgaccagctgattcaacagataaatgtcaattttcctgatgagaaa
acgaagcaatttctgaagcggctgattcacagcctggatgacaacggctatctatcagca
gaaatgcagtcagttacgggagtggaaaaaggaattgaattgctgcagcaaattggtccc
cctggcatcggtgcgcgcaatttgcgggaatgtctgctgctgcaggccaggcagagcgag
gattgtcctgaatttgctgaaacgttcattgcggattatttaccgcttgtggcggacagg
aaatggcaggatattgcgagagggatgaatatcacaatgcctcacgtgaaggaattgtat
gactttttattaacgctgaatcccagaccatgcccggagcttgcaaatacaaagacggaa
tttatggttcctgatgtgatcgtagaagaaaaacaaggcaagctgacgtttcatctgaat
gatcaggaactgccaaagatcagtctgcgcaaggaatatgtatcttcactgaaagggaag
tctgaactttctaactacctgcaaggctatcataaacaggcgcaatggttattaacgagt
atagaacagaggcgcactacgatgatccgtatcgtcacggatcttctggaaaaacagcaa
acatttttccggcaaggccgtgaagctttacagcctatgacattaaaagatattgcagac
agtatcgaaatgcatgaatcgacaatcagtcgggcggtgtcgaataaagtaatacaaaca
ccagcgggaacttttgaaatgcgttcattatttacgtccaagcttgcagcgcaaaacgga
gaaagtgtttcgcaatcgtctgtcaaagcagcgctgaaagcactcgtggcagatgaagat
aagcgaaagcctttatccgatcaaaaaattgccgactttttcttaaaggagcaaggagtg
acaatttcacgcaggacgatcagtaagtaccgggaagaattgcagattcccccatccagt
aaaagaaagtcaatcttataa
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