Sporosarcina sp. P37: SporoP37_07585
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Entry
SporoP37_07585 CDS
T04826
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spop
Sporosarcina sp. P37
Pathway
spop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP37_07585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spop03019
]
SporoP37_07585
03009 Ribosome biogenesis [BR:
spop03009
]
SporoP37_07585
Enzymes [BR:
spop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SporoP37_07585
Messenger RNA biogenesis [BR:
spop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SporoP37_07585
Ribosome biogenesis [BR:
spop03009
]
Prokaryotic type
rRNA helicases
SporoP37_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DeaD_dimer
NAT10_TcmA_helicase
AAA_22
ERCC3_RAD25_C
DUF4422
Motif
Other DBs
NCBI-ProteinID:
ARK24536
LinkDB
All DBs
Position
complement(1456797..1458305)
Genome browser
AA seq
502 aa
AA seq
DB search
MTKFSELNISETTQKALLRMGFEEATPIQEGTITFGMEGRDVIGQAQTGTGKTAAFGIPI
IEKLDPKSTAVQALVIAPTRELAIQVSEEIYKVGYGSRAKVLSVYGGQEIGRQIRALRNN
PNIVVGTPGRILDHINRKTLKLDNVQTLVLDEADEMLNMGFIEDINTILASVPAERQTLL
FSATMPAPIRKIAETFMKNPEIVKIKSKEMTVENIEQFFVKSHEREKFDVLSRLLNVQQP
ELAIVFGRTKRRVDELAHALSIRGYIAEGIHGDLTQAKRMSVLRQFKDNKIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKSGIAVTFVTPREMGYLRIVEETTK
KRMTPLKPPTSDEALLEQKKIAVETLGEAIEQKNSEDYAGFAAQLLEKYDAKEIVAAALK
SLTKDVDETPVSITEERPLPSRRPSSRSGGYKGGNRSGGRSQGGRGRSFSGGSGGSRRSS
GPRDGGRRDSGSSRRSSNRSER
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaagttttcagaattaaatattagtgaaacaacacaaaaggcattattgcgtatg
gggtttgaagaggcaactccaatccaagagggaacaatcacttttggtatggaaggccgc
gacgtaatcgggcaagcgcagacaggtactggtaaaacggcagcattcggtattccaatc
atagaaaaattggatccaaagagtactgcggttcaagcattggtcatcgcaccaactcgt
gaattagcaatccaggtatcagaagaaatttataaagtaggctacggcagccgcgcgaaa
gttctttccgtttatggcggacaggaaatcgggcgtcaaatccgtgcactgcgcaataat
ccaaacatcgttgtcggtacgccaggacgtattttagaccatattaaccgtaaaacattg
aagcttgataacgttcagacacttgtattggacgaagcggatgaaatgttgaacatggga
ttcattgaagatatcaacacgattcttgcaagtgtgccggctgagcgccagacgttgctg
ttctcagcaacaatgcctgctccaatccgcaaaattgcagaaacattcatgaaaaaccct
gaaattgttaaaatcaaatcaaaagaaatgactgttgaaaacattgaacagttcttcgtg
aaatctcacgaacgtgaaaagtttgatgtgttatcaagattattgaacgttcagcagccg
gaacttgccatcgtgttcggacgcactaagcgccgtgtcgatgagcttgcacatgcacta
agtatccgcggctatattgctgaaggaatccacggtgacttaacacaagcgaagcgtatg
tctgtattgcgtcagttcaaagacaataaaatcgatgtattggtagcaacagacgtagct
gcacgcggattggatatttcaggtgtcacacacgtttataactttgatattccgcaagat
cctgaaagttacgttcaccggattggccgtacaggccgtgcaggcaaaagcggaatcgct
gttacattcgtaacaccgcgtgaaatgggttaccttcgtattgtggaggaaacaaccaag
aagcgtatgactccgttaaagccgccaacttctgatgaagctttgcttgaacagaagaaa
attgcggtagaaactcttggcgaagcaattgagcagaaaaactcagaagattatgctggt
tttgcagcacaattgcttgagaaatatgatgcgaaagaaatcgtggcagcagctctaaaa
tcattgactaaagacgttgatgagacacctgtaagtattacagaagagcgcccgcttcct
tcacgcagaccatcttcacgctcgggcggctataaaggcggcaaccgcagcggcggacgt
tcacaaggcggacgcggaagaagcttcagcggcggttcaggcggatcgagacgcagcagc
ggaccgcgcgatggcggcagaagagacagcggatcttcaagacgcagcagtaatcgttca
gagcgataa
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