Sporosarcina sp. P37: SporoP37_11825
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Entry
SporoP37_11825 CDS
T04826
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spop
Sporosarcina sp. P37
Pathway
spop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP37_11825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spop03021
]
SporoP37_11825
03019 Messenger RNA biogenesis [BR:
spop03019
]
SporoP37_11825
Transcription machinery [BR:
spop03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SporoP37_11825
Messenger RNA biogenesis [BR:
spop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SporoP37_11825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
NACHT
AAA_25
AAA
AAA_22
NB-ARC
Spore_III_AA
AAA_14
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ARK25276
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All DBs
Position
2305644..2306924
Genome browser
AA seq
426 aa
AA seq
DB search
MTMITLADLENMTLKELYSLAKQFKITNYSKLTKKELIFAILKSRAEQEGFFFMEGVLEI
IQSEGYGFLRPINYSSSSEDIYISASQIRRFDLRNGDKVTGKVRPPKENERYYGLLQVEA
VNGQNPEVARERVHFPALTPLYPDRQIKLETAKNNISTRIMDLVSPVGFGQRGLIVAPPK
AGKTTLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPQNHVK
VAELVLERAMRLVESKRDVIILMDSITRLARAFNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALIETGSRMDEVIYEEFKGTGNMELHLDRSLAERRIFPALDIR
RSGTRKEELLIPKANLDRLWAIRKTFSDSQDFTERFMRKLRQSENNDEFFDKLNEEMKSK
KGKGLI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgattactcttgccgacctcgagaacatgacgctcaaggagctgtattctctc
gcgaagcaatttaaaatcaccaactatagcaaactgacgaagaaagaattaatctttgct
atattgaaatctcgcgccgaacaagaaggtttctttttcatggaaggcgttctcgaaatt
attcaatcagaaggatacggtttcctgcgtccgatcaattactcatccagttcggaagat
atctacatttccgcatcccaaattcgccgattcgacttgcgtaatggcgataaagtaaca
ggaaaagtccgtccgccaaaagaaaatgagcggtactatggcttgctgcaagtggaagcc
gtcaacggtcaaaatccggaagtggctcgcgagcgcgtacattttcccgcgctgacacct
ttatatccagaccgtcaaatcaaattagaaacagctaaaaataatatctctacacgcatc
atggatctcgtatcgcctgtcggtttcggtcagcgcggattaattgtcgcaccgccaaaa
gcgggaaaaacaacgctgctgaaagaaatcgccaactcgatcacgacgaatcatccggaa
gcggaattaattgtgctgttaatcgacgaacgtccggaagaagtaacagacatcgaacgt
tctgtaaaagcagacgttgtcagttccacatttgacgaagtgccgcaaaatcatgtaaaa
gtggcagaactggtacttgaacgcgcaatgcgtctcgtcgaaagtaaacgcgacgtcatc
atcctgatggattccattactcgtttggcacgtgcattcaacctggtcatcccgccaagc
ggccggacactttccgggggaatcgatccggcggctttccatcgccctaaacgatttttt
ggtgccgcgcgtaatattgaagaaggcggcagcttaacgatcctggccacagcgcttatt
gaaacaggctcccgtatggacgaagtcatttacgaagaattcaaaggaaccggtaacatg
gaactgcaccttgaccgcagcctggctgaacgcagaattttccctgcactcgatatccgc
cgatcaggtacaagaaaagaagagctgctcatcccgaaagcaaatctggacagactctgg
gcgatcagaaaaactttctcagactcccaggatttcaccgagcgcttcatgagaaaactt
cggcaatctgagaacaacgatgaatttttcgataagctgaatgaagaaatgaaaagtaag
aagggcaagggactgatctga
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