Sporosarcina sp. P37: SporoP37_13395
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Entry
SporoP37_13395 CDS
T04826
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spop
Sporosarcina sp. P37
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spop03400
]
SporoP37_13395
Enzymes [BR:
spop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP37_13395
DNA repair and recombination proteins [BR:
spop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SporoP37_13395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_16
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ARK25554
LinkDB
All DBs
Position
2665951..2669442
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AA seq
1163 aa
AA seq
DB search
MSLRFVTGRSGTGKTTFIEQEIAEELKERPMGPPIVIIVPDQQSYSMEYSLSVTRGLSGM
IRAQVLTFKRLAWRVLQEVGGITREEVDSFGYRMLVRSVLEENKDSFKLFKQAASKHGFA
EQVSDIMKEFSKYCIDRQAFAELTGSLASKEAPRILQDKAHDLQLLLEKIEERLGTTYMD
SEGQLNALAEQLPHTEWLQDASIYIDGFGDFTTQEYNIITQLMKYTKRVTVVLPMEEKLH
SGEHELFHTAEQQYETLQQLAYSESVEHEERVHLTELQRFANQELAHLEEQFDRYPPKAC
EATGAIHLIEATNRRAEVHAVARSIRKMMREGKRYRGMTVLYRQPDAYDELIQNIFTQYD
IPVFISQKKPMLHHPLIEFVRSLLEAVRTDWSYEAVFRAVKTDLFFPANESKQVWRERAD
RLENFVLAKGIHGTSRWNDEERWKVSRYRGLEKIRTVQTDEELAAQAEFAETRDLIRTPL
MELQQKLKAAVTGRDVAEALFVTLESLNVYDKIIELQQMEHTNNRLQAAAEHEQAWTSWI
NVLDQFVLMFGDKELPIAESIKILDEGFDTLEFKLIPPSLDQVTVTTVELFNSMDVEAVF
VLGANEGVLPLRNDHEGLLSDGDRELFSELGITLAPTTKLQLMRESFMVYRAFTGASQRL
TVSYPVADEEGKALIPSLYIPRLQQIVSNIPLETAVIEPTELSEVEDKLTYIEHPEVALS
YAIRMMREASAHEEIEPEWQAVLAYYTEDPLWSSIIQSIVQPALKRQKTELLEPELTAGL
YGSSFTTSVSRIESYYSCPFQHFTTYGLGLQERFEFQLEAPDIGDLFHAALKWVSDEVMR
QGLSWAALTKEQCWQLGRDAIDALAPKFFHRILLSSQRYAYIQRKLMQIIQRTIRALQSQ
ARNSRFTPIAIEAGFGPNEEIAPLEINLKNGRHMHIRGRIDRIDTMKKDDQTFLRVVDYK
SSARALDLTEVYYGLSLQMLTYLDVALEHAEDWLGVYANPAGVLYMYVHNPMLRMTKELT
EEAVEKELLKSYKMQGYIIEDAEVALGMDDRLESESLIIPARLKKDGTFYSTSKVVPPED
INMMRSFVRKRHQQAGDGMLSGDTRVYPYRLKEHMPCTFCSYQSICQFDKTDPTQPTRNY
TAFKPEESLEKMRKEIDPDANSR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcgttttgttacaggtcgctccggtacagggaagacgacttttattgaacag
gaaattgcagaagagctgaaggagcggccgatggggcctcctatcgtaatcatcgtgccc
gaccagcagtcatactcgatggaatacagcctgtccgtcacacgcggactgtccgggatg
atccgtgcgcaagtgctgacgttcaaacgccttgcgtggcgcgtgctgcaggaagtgggc
ggcatcacgcgggaagaagtcgacagcttcggctaccgcatgctcgtgcgcagcgtgctc
gaagaaaacaaagactcgttcaaactgtttaagcaggcagcctctaaacatggattcgcc
gagcaagtcagcgacatcatgaaagaattcagcaaatactgcatcgaccggcaggcgttt
gccgaactgaccggctcgctggcttccaaagaagcaccgagaattttgcaggataaggcg
catgacctgcagctgctgcttgagaaaattgaagaacgccttggaacgacctatatggac
agtgaagggcagctcaacgcacttgctgaacagttgccgcatacggagtggctgcaggat
gcatcgatctatattgacggtttcggcgactttacgacacaggaatacaacatcattaca
caattaatgaaatatacgaaacgtgtcacggttgtgctgccgatggaagaaaagctccac
agcggagagcatgaactgttccatacagcagaacagcaatacgaaacgctgcagcagctc
gcatacagtgaatctgttgagcacgaagaacgggttcatctgacggaactgcagcgcttt
gcgaaccaggaacttgcacatctggaagaacagttcgatcggtacccgccaaaagcgtgt
gaagcgaccggtgccattcatctgattgaagcgacgaaccggcgggcggaagtgcatgcg
gtggcgcggtcgattcggaaaatgatgcgtgaaggcaagcgctaccgaggaatgacggta
ttgtaccggcagccagatgcgtatgacgaattgattcaaaatatttttacgcaatatgat
atccctgttttcatcagtcagaaaaagccgatgctgcatcatccgctcatcgaattcgtt
cgttcattgctggaagcggtgcgcacggattggtcgtatgaagcggtgttccgtgcagta
aagacggatctctttttccctgccaatgaaagcaaacaagtgtggagggaaagggctgac
cgcctggagaattttgtgctggcaaaaggaattcacggcacttcacgctggaatgatgaa
gaacgctggaaagtcagccgttaccggggactggaaaagattcgcaccgtgcagaccgat
gaagaactcgcggcacaggcggagtttgcggagactcgggatttgattcgcacgccgctt
atggaactgcagcagaaactgaaagcggcagtgaccgggcgggacgtcgcggaggcattg
tttgtcacgctggaatcattgaacgtctacgataaaatcattgagctgcagcagatggaa
catacgaacaaccggctgcaggcggccgcagaacacgaacaggcatggactagctggatc
aatgtgctcgatcagtttgtgctgatgtttggagacaaggaacttccgattgcggaatcg
atcaaaattctcgatgaaggattcgatacgctggaatttaaactcattccgccgtcactc
gaccaagtgaccgtgacgacagtggagctgtttaattccatggacgtggaggccgtgttt
gtgctcggtgcgaatgaaggggtactgcctctccgcaatgatcacgaaggattattatca
gacggtgaccgggaattattcagtgaacttggcattacgctggcaccgactaccaagctc
cagcttatgcgcgaatcgtttatggtgtaccgtgcgttcacaggagcgagtcagcggctg
accgtcagttatccggttgcggacgaggagggaaaggcgctcataccgtcgctttacatt
ccgaggctgcagcagattgtatcgaatataccgcttgaaacagcagttattgagccgacc
gaactgtcagaagttgaagataagctgacgtatattgagcacccggaagtggcgctgtct
tacgcgatccgcatgatgcgtgaagcttctgcccatgaggaaatcgaacctgaatggcag
gcggtccttgcatattatactgaagatccgctctggtcatcgattatccagtcgattgtg
cagcctgctttaaaacgccagaaaacagagctgctggagccggaattgacggccggttta
tatggatcttcgtttacaacgagtgtatcgcggatcgaatcgtattacagctgtccgttc
cagcatttcacgacgtacgggcttggcttgcaggagcgttttgaatttcagctggaagca
ccggatatcggggatttattccacgcggcgctgaaatgggtgtctgatgaagtgatgcgc
caggggctttcctgggctgcgctgacgaaagaacagtgctggcagctgggccgggatgcg
attgatgcattagcgccgaagtttttccaccgtattttactgtcgagccagcgctatgca
tatatccaaagaaaattgatgcaaattattcagcggacgatccgcgcactgcagtcacag
gcgcgcaattcaagatttacgccgattgcgattgaagcagggtttggtccgaatgaagaa
atcgcgccgcttgaaattaatttgaaaaacggccggcatatgcatattagaggacgaatt
gaccgcattgacacaatgaaaaaagatgatcagacgtttctgcgtgtagtggattataaa
tcttcagcacgggcgctcgatttgacggaagtgtattacggcttgtcgctgcaaatgctg
acttatctcgatgttgcgcttgagcatgcggaagactggctcggtgtgtatgcgaatccg
gcaggggtgctgtatatgtatgtgcacaatccgatgctgcgcatgacgaaagagctgacc
gaagaagcggtagaaaaagaattgcttaaatcctataaaatgcaaggctatattattgaa
gacgctgaagtggcgctcggcatggacgacagactggaaagtgagtcacttattattccg
gcgcgcctgaaaaaagacgggacgttttattcgacgtcgaaagtagtgccgcctgaagat
attaatatgatgcgttcatttgtccggaaaaggcatcagcaggcgggcgacggaatgctg
tcaggcgatacgcgcgtgtatccgtaccggctgaaagaacatatgccatgtacgttctgt
tcgtatcagtccatctgtcagttcgacaagacggatccgacacagccgacgcggaattat
acggcgttcaagcccgaagaatcattagaaaagatgcggaaggagatagatccagatgcg
aattccagataa
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integrated database retrieval system
