KEGG   Sporosarcina sp. P37: SporoP37_13875
Entry
SporoP37_13875    CDS       T04826                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
spop  Sporosarcina sp. P37
Pathway
spop03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SporoP37_13875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spop03019]
    SporoP37_13875
Messenger RNA biogenesis [BR:spop03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SporoP37_13875
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF4453
Other DBs
NCBI-ProteinID: ARK25633
LinkDB
Position
complement(2781186..2782853)
AA seq 555 aa
MKSIKNNETAVFALGGLGEIGKNTYCVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYL
ERNIDKIKGLFITHGHEDHIGGIPYLLRKVNVPVYGGKLAIGLLRNKLEEHGLLRTTEIH
EIEEDDFIKFRKTAVSFFRTTHSIPDAYGVVVKTPSGNIVHTGDFKFDFTPVGEPANLHK
MAKIGSEGVLCLLSDSTNAEVPNFTMSERKVGESLNDIFRTVDGRIIFATFASNIHRLQQ
VIEAAQIFDRKIAIFGRSMDNAITIGRELGYIDAPKELFVDSQSLNRLPANKVMILCTGS
QGEPMAALSRIANGTHRQVQIQPGDTVIFSSSPIPGNTLSVNKTINSLFRAGAEVIHGPL
NNIHTSGHGSQEEQKLMLRLIKPKYFMPIHGEYRMMNMHSQLAIDCDVEPDNIFIMGNGD
VLALTDSSARLAGRVPSGDVYIDGSGIGDIGNVVLRDRRILSEDGLVIVVATIDTKKNRL
VSGPDLISRGFVYMRESGAMINEAQYMLSKTLQRKLAAKPDSVNNLKGDIIDTLVPYLYE
KTKRKPMILPVIMEL
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatctataaagaacaatgaaacagccgtttttgccctaggcggactaggtgaaatc
ggtaaaaatacgtattgtgtacaattccaggacgaaatcattattattgatgccggcatt
aagttccctgaagatgaattactaggcattgattacgtaattccggattacacatactta
gaacgcaatatcgacaagattaaaggacttttcatcacacacggccacgaagatcatatc
ggcggaattccttacttgctgcgcaaagtgaacgtacctgtatatggaggcaaactggca
atcggactgcttcgcaataagctggaagagcacggcctattgcgcacaacggaaattcat
gaaattgaagaagatgatttcatcaagttccgtaaaacagcagtatcgtttttcagaact
acacacagtattcctgatgcgtacggagtagtcgtcaaaacaccttcaggcaatattgtt
catacaggagacttcaagtttgacttcacgcccgtcggtgaaccagccaacttacacaag
atggcgaagatcggcagtgaaggcgtcctttgcctattgtcagacagtacgaatgcagaa
gtgccaaactttacgatgtctgaaagaaaagtcggagaaagcctgaatgatattttccgt
acagtagacggccggattattttcgctacattcgcttcaaacattcatagactgcagcaa
gtcatagaagcagcacagatcttcgaccgtaaaatcgcaattttcggacgaagcatggat
aatgcgattaccatcggacgcgaactcggatatattgatgcgccgaaggaactgtttgtg
gattcgcagtcactcaaccgcctccctgccaataaagtcatgattttatgcaccggcagc
caaggggaaccgatggcggcattatcccgcattgcaaacggtacgcacagacaagtgcaa
atccagcctggagacacagtcatcttttcatcatcaccaattccaggaaatacactcagc
gttaacaaaacgatcaactctctgttccgtgcaggcgcagaagtaatccacggtccatta
aacaacatccatacatccggacacggatcacaggaagagcagaaactcatgctgcgttta
atcaaaccgaagtacttcatgccgatacacggtgagtaccgtatgatgaatatgcattct
caacttgcaatagactgcgatgtcgagccagataatattttcatcatggggaatggagac
gttcttgcacttactgattcatcagcaagacttgcagggcgtgtaccttcaggcgatgtc
tacattgacggcagcggaattggagatatcggcaacgttgtactgcgtgaccgccgcatc
ctgtcagaagatggcctggtgatcgttgtagccacaattgatacgaagaagaaccgctta
gtttcgggtcctgatctcatttctcgcgggtttgtctatatgcgcgaatcaggagcaatg
atcaatgaagcacagtatatgctgtccaaaacattacagcgtaaactggctgcaaaaccg
gattctgtgaacaacctaaagggcgatattattgatacactcgttccgtatctgtatgaa
aaaacaaagcgtaaacctatgattcttcctgttattatggaattgtaa

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