Sporosarcina sp. P37: SporoP37_14725
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Entry
SporoP37_14725 CDS
T04826
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
spop
Sporosarcina sp. P37
Pathway
spop02020
Two-component system
spop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SporoP37_14725
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SporoP37_14725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spop03021
]
SporoP37_14725
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spop02035
]
SporoP37_14725
Transcription machinery [BR:
spop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SporoP37_14725
Bacterial motility proteins [BR:
spop02035
]
Flagellar system
Flagellar assembly proteins
Stator
SporoP37_14725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DnaD_N
UPF0122
TRIP4_3rd
Motif
Other DBs
NCBI-ProteinID:
ARK25792
LinkDB
All DBs
Position
2947722..2948501
Genome browser
AA seq
259 aa
AA seq
DB search
MANQDVTERHQWKLWIENRDPDAGDTLVRMYTPLVNYHVQRISAGLPKNVSRDEIKSLGY
QGLFDALTKFDPARDLKFDTYASFRIRGTIIDGLRKEDWLSRSSREKTKKMDEEISKLEQ
TYLRSVTPEEVADHLGVTTDQVYQTVHEQYFANVLSIDEKMNDDDEQNDQTFVLQDEKTK
TPEQQSVKNELLSDLTAKIKELNENEQLVLSLFYQEDMTLTEIGEILSLSTSRISQIHSK
ALFKLRSLLAAEITDGGIL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaagacgtaactgaacggcatcagtggaaattatggatcgaaaaccgtgat
cctgatgcaggtgatacgttagttcggatgtatacacctcttgtcaattatcacgtacag
cgaatcagtgccggactgccgaaaaacgtttcacgggacgaaatcaaatcactcgggtat
cagggtctttttgatgcacttacgaaattcgaccctgcccgtgatctgaagttcgatacg
tatgcgtcttttcgtatacgcggcaccattatcgacgggctgcggaaagaagactggctg
tcccgctcctcccgtgaaaaaacgaaaaaaatggacgaagagatcagcaagctggagcag
acttatttacggtcggtaacaccggaagaagtggcggatcatttaggcgtgactacagat
caagtctatcaaaccgtgcatgaacagtattttgctaatgtcttatcgattgatgagaag
atgaatgacgatgatgaacaaaatgatcaaacattcgtattgcaggatgaaaaaacaaaa
acaccagaacagcaatccgtaaagaatgaattgctttcagacctgacggcaaagattaaa
gaactgaatgaaaatgaacagctcgtgttaagtttattttatcaggaagatatgacgctg
actgaaataggtgagattctaagtttatctacttctcgaatttcccaaattcattcaaaa
gcgttatttaaattacggtcgctgcttgcggctgaaattacggacggagggattttatga
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