Sporosarcina sp. P37: SporoP37_14825
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Entry
SporoP37_14825 CDS
T04826
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spop
Sporosarcina sp. P37
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spop03016
]
SporoP37_14825
Enzymes [BR:
spop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SporoP37_14825
Transfer RNA biogenesis [BR:
spop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SporoP37_14825
Prokaryotic type
SporoP37_14825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ARK25810
LinkDB
All DBs
Position
2968392..2969303
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AA seq
303 aa
AA seq
DB search
MHGILPLWKEKGMTSHDCVFKLRKILRTKKVGHTGTLDPEVEGVLPICIGRATKVASYIT
DAGKEYIATVSIGRATETEDAQGETVASDLTHKEFSRAQINEALAQLTGEITQIPPMYSA
VKVNGRRLYEYARKGIEVERPVRKVHIDQIELLGEDQQFSGEEVTFSIRVRCGKGTYIRT
LAVQIGEILGYPAHMHSLVRTVSGNFDQSDCNTLADVAQLMEEQNIQSILRPIEEVLTDF
PQLQIDEQLLESIRNGQVLPAVPLLAEHPSIVMMFEGHVLAIYQNHPTKPGLMKPEKMLL
GSE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtattctgccattatggaaagagaaaggcatgacatcacatgattgtgtgttt
aaactgcggaagatcctgcgtactaaaaaagtagggcatacgggcacactggatccggaa
gtggaaggtgttttgccaatctgcattggaagagcaacaaaagtagcttcttatatcacg
gatgcagggaaagaatacattgcgactgtttcaattggccgcgctacagaaacggaagat
gcgcaaggggaaactgtagcaagtgacctgacgcataaagaattttccagggcacaaatt
aacgaagcgctcgcgcagctaactggagaaattacacaaatccctccgatgtattccgcg
gtaaaagtaaacggcagacgtctgtatgaatatgcaagaaaaggtatcgaagtagaacgt
cccgtacgtaaagtacatatcgatcaaatagaactgctgggtgaagaccagcaattcagc
ggagaagaagtgacattttccattagagtccggtgcggaaaaggaacgtatatccgcacg
ctggctgtgcaaataggagaaattttgggctatcctgcacatatgcattcgttagtccgg
actgtttcgggtaactttgaccagtctgactgtaatacattggccgacgtcgcccagctg
atggaagaacaaaacattcagagtattttgcgccctatcgaggaagtgttgacggatttc
ccgcagctgcaaatagatgaacaactgctggaatcaatacggaacggccaagtactcccg
gcggtcccattgctggctgagcatccatccatcgtgatgatgtttgaagggcatgtgctg
gcgatctatcaaaatcatccgacaaaacccggattaatgaagccggagaaaatgctgctg
ggcagtgagtaa
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