Sporosarcina sp. P37: SporoP37_14840
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Entry
SporoP37_14840 CDS
T04826
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spop
Sporosarcina sp. P37
Pathway
spop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP37_14840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spop03019
]
SporoP37_14840
03016 Transfer RNA biogenesis [BR:
spop03016
]
SporoP37_14840
Enzymes [BR:
spop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SporoP37_14840
Messenger RNA biogenesis [BR:
spop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SporoP37_14840
Transfer RNA biogenesis [BR:
spop03016
]
Prokaryotic type
tRNA degradation factors
SporoP37_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
ARK25813
LinkDB
All DBs
Position
2970798..2972918
Genome browser
AA seq
706 aa
AA seq
DB search
MSEQKKVYTLDWAGRTLTIEAGQLAKQANGAVLVRYGDTTVLSTVTASKKPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLTSRLIDRPIRPLFPDGFRNDVQVISLVMSV
DQDCSSEIAAMIGSSLALSISDIPFDGPIAGVQVGRIDGEFIVNPTPSQLETSEIDLIVA
GTKDAINMVEAGAKEVTEEIMLEAIMFGHDEIKKLIEFQEKIAAEIGKEKFEVEVFEFDA
DIIKEVKDRCESDLIAAIQTEEKHAREEAISEVKTAVLDYYEESEADEDTIKQVKAILEQ
MLKDEVRRLITDDKVRPDGRGLDEIRPLSSETGLLQRAHGSSLFTRGQTQVLSVCTLGAL
GEVQIIDGLGLDESKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALLPVLPDEV
EFPYTMRLVAEVLESNGSSSQASICASTMAMMDAGVPIKSPVAGIAMGLIKKDENYSILS
DIQGMEDHLGDMDFKVAGTEKGITALQMDIKIDGLSRQILEESLEQAKIGRIKILNHMMT
TISSTREELSEYAPKIVVIHIKPDKIRDVIGPGGKVINKIIEETQVKIDTEQDGTIYIAS
PNSEMNAKAKKMIEDIVREAKVGEYYLAKVKRIEKFGAFLELFPGKDGLLHISEIQEART
KAVEDELKLDDELLVKVIEIDRQGRVNLSRKVVIQEEKEKEQANKE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacagaaaaaagtttatacactcgattgggctggacgtacgctaacgatcgaa
gccggccaacttgcaaagcaagcaaacggtgctgtactcgtccgctacggtgatacgaca
gtactttctacggtaaccgcttctaagaaaccaaaacctctagattttttcccgcttaca
gttaactatgaagaacgtttatacgcagttggtaaaattcctggaggatttatcaagcgt
gaaggccgcccatcagaaaaagcagtgttgacgagccggttaattgaccgtccgatcaga
cctttattcccggatggcttccgtaatgatgtgcaggtgatttcacttgttatgtcggtg
gaccaagattgttcttcagaaatcgcagcgatgatcggctcttccttggcattatcaatt
tcagatattccgtttgacggcccaattgcaggtgttcaagtcggccgtattgacggcgaa
ttcattgttaacccgacaccaagtcagttggaaacatctgaaatcgatttgattgtggca
ggaacaaaagatgcgatcaatatggtagaagcaggagctaaagaagttactgaagaaatc
atgcttgaagcgattatgttcggccacgatgaaattaagaagctgattgaattccaagag
aaaattgctgctgaaatcggcaaagaaaagttcgaggtcgaagtattcgaatttgacgca
gatattatcaaagaagtgaaagaccgttgtgaatcggatttaattgcagcgatccaaaca
gaagaaaagcatgcacgtgaagaagctatcagcgaagtgaaaacagcagtccttgattac
tatgaggaatcggaagctgatgaagataccattaaacaagtgaaagcaatccttgagcaa
atgctgaaagatgaagtgcgccgtctgattacagacgataaggtccgaccggatggccgc
ggacttgacgaaattcgtccattgtcatctgaaacaggccttctgcagcgtgcgcacggt
tcttctttatttacacgcggccaaacgcaagtattaagcgtttgtacgttgggtgcgcta
ggtgaagttcagataattgacggattaggcttggatgaatctaagcgattcatgcatcac
tacaacttccctaacttcagtgtcggagaaacagggccgatccgcggaccgggccgacgt
gaaatcgggcatggagcattaggcgaacgtgcattattgccggtgctgcctgacgaagtg
gaattcccttacacaatgcgcctagtggcggaagttctggaatccaacggttcatcttca
caagcatccatctgtgcgtcaacaatggctatgatggacgcgggcgttccgattaaatca
ccggttgccggaattgctatgggcttaattaaaaaagatgaaaactattccattttgtct
gatattcaaggaatggaagaccatttaggtgatatggactttaaagttgcaggtactgaa
aaaggaattactgcactgcaaatggatattaaaattgatggtttgtcccgtcaaatttta
gaagaatccctggagcaggcgaaaatcgggcgtattaaaattcttaatcatatgatgacg
actatttcttcaacacgtgaggaattatctgagtatgcaccgaaaattgtagtaatccat
attaaaccggataagatccgcgatgtaatcggaccgggcggaaaagtaatcaataaaatt
atcgaagaaacgcaagttaaaatcgatactgagcaagacggaacgatttatatcgcatca
ccaaactctgaaatgaacgcaaaggccaagaagatgatcgaagacatcgtgcgtgaagca
aaagtcggggagtactacctcgcgaaagtgaaacgcattgagaaatttggcgcattcttg
gagctattccctggtaaagatggcttgcttcacatttctgaaatccaggaagcccgcacg
aaggctgtggaagacgaattgaagcttgacgatgagctgcttgtaaaagttatagaaatt
gacagacagggccgggttaatctttcccgtaaagttgttattcaagaagaaaaagaaaaa
gaacaagcgaacaaagagtaa
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