Sporosarcina sp. P37: SporoP37_15345
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Entry
SporoP37_15345 CDS
T04826
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spop
Sporosarcina sp. P37
Pathway
spop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP37_15345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spop03019
]
SporoP37_15345
03400 DNA repair and recombination proteins [BR:
spop03400
]
SporoP37_15345
Enzymes [BR:
spop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP37_15345
Messenger RNA biogenesis [BR:
spop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SporoP37_15345
DNA repair and recombination proteins [BR:
spop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SporoP37_15345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
HEM4
Motif
Other DBs
NCBI-ProteinID:
ARK25906
LinkDB
All DBs
Position
3079972..3081411
Genome browser
AA seq
479 aa
AA seq
DB search
MKLQEVLEQRFGYDSFRPGQREVITELLAGKDALAIFPTGMGKSLCYQLPAYMLEGAVVI
ISPLVALMEDQVANLRKHKEKRVVAINSFLSRKEKDMALAALGQYKFIFLSPEMMMQSAV
QQLVRKLHIAFYVVDEAHCISEWGFDFRPDYLRLKELFSDAARPPVLALTATANEKVIED
ITSYLQMRQPHIERQPIDRPAISYRVVHMEKEAAKTEWIIERLSATIGPGIIYVASRKRA
DELAAAIRERGIRTASYHGGKEQDERSIIQEQFVQGELEWICATNAFGMGIHKDDIRQII
HEHIPAAPSAYIQEVGRAGRDGKKAAATLLYSERDIQKVKFIVYDDLPDEQQIRYYHSLM
QAGTDAQAAAEQAGLTEVSARLLDYYFEEFDTENVVCQIQRIFQNKEKQIAEMESYVTSE
NCLRNTLVRFFGENALPAEADCCSNCQNLDDTWLNMPDSPPKQVSEPLQWRERLHSLLG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcaggaagtgcttgaacagcgatttggctatgattcattccgtcctgggcag
cgggaggtcattactgaattacttgccggaaaggatgcgctggcaatttttccgacaggc
atggggaaatcgctttgctatcaattaccagcctatatgcttgaaggtgcagtagttatt
atttctccgctcgtcgcactaatggaggatcaggtcgctaatttacgaaagcacaaagag
aagcgtgtcgttgcgataaactcttttttatccaggaaagaaaaggatatggctcttgca
gcgctagggcaatataaatttatctttttatcgccagaaatgatgatgcagtctgcggtt
cagcagctcgttaggaagttgcacatcgcattttatgtagtcgatgaagcgcactgcatt
tcggaatgggggtttgactttcgtcctgattatttacgtttaaaggaactgttttcggat
gcggcacggccgcctgttcttgcgctgacggcgaccgccaatgaaaaagtcattgaagac
atcacatcctatctgcagatgagacaaccgcatattgaacgtcagccgattgatcggccg
gctatttcataccgtgtcgtacatatggagaaagaggcggcaaagaccgagtggatcatt
gaacggctctctgcgacaatcggtcccggaattatctatgtagcctccagaaagcgggca
gatgaactggcagcagccataagagaacgaggcattcgaacggcgagctatcacggcggt
aaagaacaggatgaacggtccatcatacaggaacaatttgtacaaggggagcttgagtgg
atttgcgcgacgaatgcatttggcatgggcatccataaagacgatattcggcaaatcatt
catgagcatattccggcggcgccaagtgcatatattcaggaggtaggccgtgcgggacgt
gatggcaaaaaggccgccgctacgcttttatacagtgaacgcgacatccaaaaagtaaag
tttatcgtttatgacgatcttccggacgaacagcaaatccgctattatcattcgcttatg
caagcgggcacagatgcgcaggcggccgctgaacaagcagggttaacagaagtctcagcc
cgcttgctggattattatttcgaagaattcgacacagaaaatgttgtctgtcaaattcag
cggatttttcaaaacaaggaaaaacaaattgccgaaatggagagctacgttactagtgaa
aattgtctgcggaacacacttgtaagattttttggcgaaaatgctctccccgcagaagcc
gattgctgttccaattgtcagaacttggacgacacttggctgaatatgccggattctccg
ccgaaacaagtgtcagaaccattacagtggcgggaacgattacacagcttattgggataa
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integrated database retrieval system
