Sporosarcina sp. P37: SporoP37_16160
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Entry
SporoP37_16160 CDS
T04826
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spop
Sporosarcina sp. P37
Pathway
spop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SporoP37_16160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spop03400
]
SporoP37_16160
Enzymes [BR:
spop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SporoP37_16160
DNA repair and recombination proteins [BR:
spop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SporoP37_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
AAA_28
AAA_22
AAA_16
UvrD-helicase
AAA_18
AAA_12
nSTAND3
AAA_14
JHBP
AAA_17
TsaE
RsgA_GTPase
UvrD_C
AAA
AAA_33
NPHP3_N
KTI12
Rad17
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ARK26058
LinkDB
All DBs
Position
3218170..3220605
Genome browser
AA seq
811 aa
AA seq
DB search
MNESEQYVIGRPVVTIFHNTANLFSIVKMKITSTNTDYRDKEIVIKGSFPPLIAEEDYKF
TGRLVNHPVHGQQFDVQTFTKELPATEAGLIHYLSGDLFPGIGKKTAGDIVKILGNNVIQ
KILEDRSVLDQVPRLSEERKDTLVAVLQENLGLERTMVQLNEWGFGPQVAMRIYQAYQDD
AITILTENPYRLIREIEGIGFQRADDLAQQLGLVGDHPARIKAAVYYSVHSEVNSAGHVY
VESEAILPQAKQLLEASQPHSISYEAITQAVIELVEEGALSAEMQRLYLPSLYYSEIGIA
AKVNKILENEVDEQFPASEIRKAIGEIEERLEVEYAETQVEAIERALHSPLLVLTGGPGT
GKTTVIRGLVEAYAELHGISLDVEEYARKKEPFPIILAAPTGRAAKRMSESTGLPAMTIH
RLLGFTGQEDEEETEREVEGNLIIIDETSMVDTWLMHQLLKAVRNDAQLLFVGDQDQLPS
VGPGQVLHDFMRSGKIPVVELTDIFRQSEGSTIIELAHMIKQKELTMDVTKKTSDRSFIK
ASSEQILPAVKQIIQSAVSKGHSIKDIQVLAPMYKGPAGIDGLNKMIQEIINPPASGRKE
MVFGETTYRVGDKVLQLVNQPESNVFNGDMGEVVAIMLAKETTDKKAIMVVSYDGNEVQY
ERSDLNQLTLAYCCSIHKSQGSEFPIVVMPIVKSQRKMLRRNLLYTGITRAKNFLILCGE
AEEFKAGIARTDETERQTTLKERIEGETAGQPETKAVPSETAARPEKVTVQETMKQEDAS
PAKLTMDNFTAIDPMIGMSDLSPFDFLEATD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatctgaacaatatgtaatcggcagaccggtggtgacgatttttcataatacg
gcgaatctgttttccatcgtcaaaatgaaaatcacatccacaaatactgattaccgtgat
aaagaaatcgtcattaaggggtcattccctcctttgatagccgaagaagattataaattc
acggggcgtcttgtcaatcatcccgtgcacggacagcaatttgatgtccagacatttaca
aaagaattaccagcaaccgaggcgggtctcatccattacttgtctggtgatctgtttccg
ggcatcggtaaaaaaactgccggtgatatcgtgaaaatactcggcaataatgttatccag
aagattttggaagaccgcagcgtactcgatcaagttccccgcttgagcgaagaaagaaaa
gataccctcgttgccgtgctgcaggagaacctcggactggaacggacaatggtccagctg
aatgaatggggtttcggaccgcaagtggctatgcgtatttatcaggcgtatcaggacgat
gccattacgatactgaccgaaaacccttatcggctgatcagagaaattgaaggaatcggc
tttcagcgtgcagatgatcttgcacagcaactgggacttgtaggcgatcatccggcgcgt
attaaagcagctgtttattacagcgtacatagtgaagtgaactcagcagggcatgtgtat
gtggaatcagaagcaattcttccgcaggcaaagcagctgctagaagcgagtcagccgcat
agcatttcgtacgaagccattacacaggcagtcatcgagctcgtggaagaaggcgcactt
tctgctgaaatgcagcggctgtaccttccgtctctgtattattcggaaattggcattgct
gccaaagtgaataaaatattggaaaatgaagtggacgaacagttccctgcatctgaaatc
agaaaagcaattggtgaaattgaagaacgtcttgaagtggagtatgccgagacacaggtg
gaagcgatagaacgcgctctccattccccgcttctcgtattgacaggagggccggggaca
gggaagacaactgttattagagggctggtcgaggcgtacgcggaattgcatggaatatct
ctggatgtagaagagtatgcacgtaaaaaggagccgttcccgattattttagctgctcct
acaggacgtgcggcaaaacggatgtcggaatctacagggctgcctgccatgaccattcat
cgtcttctcggctttacaggccaggaagatgaagaagaaaccgagcgggaagtagaaggc
aatctcatcattattgatgaaacgtccatggtggacacatggctaatgcatcagctgcta
aaagcagtccgcaatgacgcccagctgttattcgtcggagaccaggatcagctgccttct
gtcggaccgggacaagtgctgcatgattttatgcggtccggtaaaattcctgtcgtcgaa
ctgacggatattttccgccaaagtgaaggctccaccatcatcgaactcgcacatatgatt
aaacaaaaagaattgacgatggatgtgactaaaaaaacgtccgaccgttctttcataaaa
gcttcaagtgaacagattttacctgctgttaaacagattatccaaagcgctgtgtcaaaa
ggtcattctattaaagatatccaggtgcttgctccgatgtacaaaggaccggcgggaatt
gacggattgaacaagatgattcaggaaatcataaatccgcccgcatcaggcagaaaagaa
atggtcttcggcgaaaccacttaccgtgtcggcgataaagtgctgcagctcgtgaatcag
ccggagagcaatgtctttaacggtgatatgggcgaagtggttgctatcatgctggctaaa
gaaacaactgacaaaaaagccattatggtcgtttcatacgacggcaatgaagtgcaatat
gaacgcagcgacttaaatcagctgacgctcgcctattgctgttctatccataaatcccag
ggaagtgaattcccgattgtcgttatgccgatcgtcaaaagccagcgtaaaatgctgcgg
cgcaatctgctctatacaggcattacacgtgcaaaaaactttttaattttatgcggtgaa
gcagaagagttcaaagcaggtattgcacgcacagatgaaacagaacggcagaccacgctg
aaagaacggattgaaggagagacagcgggacagcccgaaacgaaagccgttccatctgaa
actgcggcgcgtcccgaaaaagtgaccgtacaggaaacgatgaaacaggaagatgcatcc
ccagcaaaattaacgatggataatttcactgcaatcgatcctatgatcggtatgtctgat
ttgtcaccattcgactttctggaggcgactgattga
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