Sporosarcina sp. P33: SporoP33_00050
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Entry
SporoP33_00050 CDS
T04790
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
spor
Sporosarcina sp. P33
Pathway
spor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SporoP33_00050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_00050
Enzymes [BR:
spor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SporoP33_00050
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SporoP33_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ARD49566
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All DBs
Position
8552..9439
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AA seq
295 aa
AA seq
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MLLGSHVSMSGKKMLLGSSEEALSYGANTFMIYTGAPQNTRRKPIEELNIESGTQHMKEN
GQSNIVVHAPYIINIANTAKPETFRLGVDFLQQEIQRTEALGANRIVLHPGAHVGAGTDA
GIAKIIEGLNEVLSEKADVSIALETMAGKGTECGRSFDEIARIIDGVKHNERLSVCFDTC
HVHDAGYDIVNDFSGVLDEFDSIVGLDRISVIHVNDSKNERGAGKDRHENIGMGHIGFEP
LAYIVHHPTFKEIPKILETPFIGTDKANKKAPYAVEIEMLKKRQFTPELLEALHS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atccttctcgggtctcacgtatccatgagcggcaaaaaaatgctgcttggctccagtgaa
gaagcactgagctacggggccaatacattcatgatctatacgggtgctccgcaaaatacg
cgacgtaaaccaattgaagaattaaatattgaaagcggtacgcagcatatgaaagaaaac
gggcagtcaaacattgtcgtacacgctccctacatcatcaatattgcgaacaccgcaaag
cctgaaacattccgccttggcgtggactttttgcagcaggaaatccagcgtaccgaagcg
ctcggagcgaaccggattgtccttcatccaggtgcgcatgtcggagccggaacggatgca
ggcatagcgaaaattattgaaggcctgaatgaagttctttctgaaaaagctgatgtcagc
attgcgctggaaacgatggccggcaaaggaacggaatgtggacgaagctttgatgaaatt
gcgagaatcatcgatggtgtgaaacataacgaacgtttgtctgtctgcttcgacacatgt
cacgtgcacgatgcggggtatgatatcgtgaatgatttctcgggtgtcttggatgaattc
gacagtatcgtcggacttgacagaatatccgtcattcacgtaaatgacagcaaaaatgaa
cggggtgcaggaaaagaccgccacgaaaatattggaatgggacatattggctttgaacct
ctggcttacatcgttcaccatccaacattcaaagaaattccgaaaatcctggaaacacca
tttatcggaacagacaaagcaaataaaaaagcaccttatgcagtcgaaattgaaatgttg
aaaaaacgtcaattcactcctgaattactggaagcactgcatagctga
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