Sporosarcina sp. P33: SporoP33_00375
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Entry
SporoP33_00375 CDS
T04790
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
spor
Sporosarcina sp. P33
Pathway
spor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SporoP33_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_00375
Enzymes [BR:
spor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SporoP33_00375
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SporoP33_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DUF4197
LepB_GAP_N
Motif
Other DBs
NCBI-ProteinID:
ARD46842
LinkDB
All DBs
Position
65664..67013
Genome browser
AA seq
449 aa
AA seq
DB search
MSNPTFLTVQALTKYVKRKFDADPHLRNVYVKGELSNVKMHPSGHIYFTLKDDKTRIQAA
MFRSRSNTLKFKPENGMNVLITGDVTVYETAGSYQLYVQTMEPDGIGALYLAFEQLKKKL
QQEGLFEARFKQPIPQVPQRIGIITAESGAALRDMYSTINRRFPMAEMHLFPALVQGPTA
APSIVKAIEQANRTGSLDVLIVGRGGGSIEDLWAFNEEDVARAIFSSRIPIISAVGHETD
TTIADYVADLRAPTPTAAAEMAVPDQLQLFRHLKNQQRSMYLAVQTLLKQLNKRLETAQA
AYPLQYPDRLYRPFIEKLDHLEDRLQRSSAAVIQEKRMHFDRLYAGFQYYMPIRRIQLEQ
QQTEQLEMRLNRAAEQTIRQRQQHFVSLMRMMQALNPLQVMERGFSIGYKDGEVIKSVQD
VTSGDKLTLQLADGSVSAIVEQIIPKEVK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccaacttttttaaccgttcaagcgctaacgaaatatgtcaaacgtaaattt
gatgcggatccgcatttgcgtaatgtctatgtgaaaggcgaactatccaacgtaaaaatg
catccgtccggacatatttattttacgctgaaagatgacaaaacaagaatccaggcagca
atgttccgttcccgttccaacacgctgaaatttaagccggaaaacggcatgaatgtgctg
attaccggtgacgtcacagtgtacgagacggcgggatcgtatcagctctacgtacaaaca
atggagccggatggtattggggcgctgtacctagcttttgaacagttgaaaaagaaattg
cagcaagagggattgtttgaagccagatttaaacagccgattccgcaagttccgcaacga
atcggcatcattactgcggaatctggagctgcactgcgtgatatgtattcgacaatcaac
agacgctttcctatggcagaaatgcacctgttccctgcgctagtgcaaggaccgacagct
gcgccatcgattgtcaaagcaattgagcaggctaaccgtacaggttcactggatgtattg
attgtcggacggggcggcggctccatagaggatttatgggcattcaatgaggaagacgtg
gcacgtgccatcttctcaagccgcatcccaattatcagcgccgtcggtcatgaaacggat
acaaccattgcggattatgtcgcggatttgcgcgcaccgacgcctaccgcggcggcagaa
atggccgttccagatcagcttcaactattccggcatctgaaaaatcagcagcgttcgatg
tatttagcagtccagacgttactgaaacaattaaacaaacgtttagaaaccgcgcaggcc
gcctatcctctgcagtatccggatcggctgtaccggccgtttattgagaaactggatcat
ctggaagaccggcttcagcgcagcagcgccgccgtcattcaagaaaaacgaatgcatttc
gaccggctgtatgctggattccagtattacatgccgattagacgcattcagcttgaacaa
cagcagacggagcagcttgaaatgcgtctgaatcgcgcagcagagcaaacgatcagacag
cggcagcaacattttgtatcactcatgcgcatgatgcaagcgctgaatccattacaagtg
atggaaagagggttttccatcggatataaagacggcgaagtaattaaatctgttcaagat
gtgacgagcggagataaattaacgcttcaattagcagacggatccgtttcagcaatagtg
gagcagatcattccaaaggaggttaagtaa
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