Sporosarcina sp. P33: SporoP33_02220
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Entry
SporoP33_02220 CDS
T04790
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spor
Sporosarcina sp. P33
Pathway
spor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SporoP33_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_02220
Enzymes [BR:
spor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SporoP33_02220
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SporoP33_02220
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SporoP33_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR_2
PknG_rubred
Motif
Other DBs
NCBI-ProteinID:
ARD47174
LinkDB
All DBs
Position
complement(463594..464466)
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVRDLAPLVEGRTVKQLSVSDTVVTSKLAGKETIIKGKTVEDFLQGMEQMH
IEKIVRRSKYIYFHLLKDSRPHLLVSHLGMTGAWFVVNSPDDITEDKFRKHAHIFLEMED
GGLLVYSDIRRFGEMRLLQSEEDFPPLLDMAPEPFAEEALEHFLSMAESPKYKKKPIKEV
IMDGKVISGCGNIYATEALFHMKIHPGRAAERISRKRKILLFEEIVRVLQESIDAGGSTI
SDYRSVNGNAGTMQDRLHMYGKKICTVCGKPTKSRQIAGRTSVYCPACQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtagaaggagtggtgcgggatctcgcaccgcttgtggaagga
cggacggtcaaacagctttcagtctcggataccgttgtgacgtcaaaattagcaggaaaa
gaaacaatcattaaaggcaaaacagtggaggactttcttcaggggatggagcagatgcac
atcgagaagattgtccggcgcagtaaatatatttattttcatttattgaaagacagccgt
ccgcatttgctcgtcagccatttaggcatgacgggcgcgtggttcgtcgtcaattctccc
gatgacattacagaagacaagtttcgtaaacatgcccatatttttttggagatggaagac
ggcggtctgctcgtctattcggacatacgcagatttggcgagatgcgtcttttacagtca
gaagaagattttccgccgttgctggatatggcgccggaaccgtttgccgaagaggcgctg
gaacattttctgtctatggcagaatcgccgaaatataaaaagaagccaattaaagaagtg
attatggacggaaaagttatttcaggctgcggcaatatctatgcgacggaagctttattc
catatgaaaattcatccggggcgagcggcagaacgaatcagcagaaagcggaaaatcctg
ctatttgaagaaatcgtgcgcgtgctgcaggagagcattgatgcgggaggcagtacgata
tcagattaccgttcggtcaacggcaatgcgggaacgatgcaagaccgattgcatatgtat
ggaaaaaagatctgtactgtctgcggtaagccgacaaagagcaggcagattgcgggcagg
acatctgtctattgccctgcttgccaaaaataa
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