Sporosarcina sp. P33: SporoP33_02225
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Entry
SporoP33_02225 CDS
T04790
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spor
Sporosarcina sp. P33
Pathway
spor03030
DNA replication
spor03410
Base excision repair
spor03420
Nucleotide excision repair
spor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SporoP33_02225
03410 Base excision repair
SporoP33_02225
03420 Nucleotide excision repair
SporoP33_02225
03440 Homologous recombination
SporoP33_02225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spor03032
]
SporoP33_02225
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_02225
Enzymes [BR:
spor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SporoP33_02225
DNA replication proteins [BR:
spor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SporoP33_02225
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SporoP33_02225
NER (nucleotide excision repair)
GGR (global genome repair) factors
SporoP33_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Skp1_POZ
Motif
Other DBs
NCBI-ProteinID:
ARD47175
LinkDB
All DBs
Position
complement(464477..467101)
Genome browser
AA seq
874 aa
AA seq
DB search
MTKKKVLLLDGNSLAYRAFFALPLLTNEKGIHTNAVYGFTMMLEMILEKEKPTHMLVAWD
AGKTTFRHSTYTEYKGGRQKTPPELSEQFPYIRKLIEAFGIEQYELDRYEADDIIGTLSK
ECSEAKAEVVVISGDKDLTQLSNEHTTVCITRKGITDLEIYTPAHIEEKYGIAPLQIIDM
KGLMGDASDNIPGVPGIGEKTALKLLKEYGSVENVYESIDQITAKKMKENLVNNKEQAFM
SKELATIEVDAPITVSLQELDYAGRNEEEVIQLYKELQFKSLLEKMDAPVEVEPLEEIGV
HHVEEITSDMLTDTMALHVEIDGENYLSGDVLGIGLSNDEQTYFISTELAASSGVFKKWI
EDHGTRKYVSDSKSAYAAIARLGLELAGIDFDLMLAAYIVNPSFSTNEVSEIARSFGYHG
VENDETVYGKGAKRSLPAAEQLANHTARKAHAVWELYPVITKQLEDNEQRDLFHDLELPL
AKILGKMEVTGVRTDVDVLRSIGEELSERLAVIEKTIYEMAGEKFNINSPKQLGVILFEK
IGLTPIKKTKTGYSTAADVLEKLESEHEIIQHILLYRQLGKLNSTYIEGLTKEIHEDGKI
HTRFQQALTQTGRLSSINPNLQNIPIRLEEGRKIRAAFIPSEKDWIMFAADYSQIELRVL
AHISQDEKLIEAFRQGADIHTKTAMDVFGVKEDEVDGNMRRAAKAVNFGIVYGISDYGLS
QSLNITRKEAGEFIDTYLASFPGVKQYMDNSITDAKQKGYVTTLLKRRRYLPDITSSNFN
LRGFAERTAMNTPIQGTAADIIKQAMIDMDARLEEENLQARMLLQVHDELIFEAPMEELE
KLKEIVPEVMEQTIQLDVPLKVDWNYGKSWYETK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaaaagaaagtgctcttattggatggaaacagcttagcgtaccgtgcgtttttc
gcgctgcctttattgacgaatgaaaaagggattcacacaaatgcggtatatggttttact
atgatgcttgaaatgattctggagaaagaaaaaccgacgcatatgctggtagcctgggat
gccgggaaaacgacgttccgccacagcacgtacaccgaatacaaagggggccgccaaaag
accccgcctgagctgtcagaacaattcccatacatccgtaagctgattgaagcatttggc
attgaacagtatgaactcgaccgctacgaagcggatgacatcatcggaacactaagcaaa
gaatgcagtgaagccaaagcggaagttgtcgttatttcaggtgataaggatttaacacaa
ttatcaaatgaacatacgaccgtatgcattacgagaaaaggaattaccgatctcgaaatc
tacacgcctgcacatatcgaagaaaagtacggcattgcccctttgcagattatcgacatg
aaaggtctgatgggtgatgcatccgataatattccaggtgtgccgggaatcggagaaaaa
actgcgctgaagctgctgaaagagtacggttctgtagaaaacgtctatgaatcgatcgat
caaattaccgcaaagaaaatgaaggaaaacttagtgaataataaagagcaggcatttatg
agtaaagagcttgcaacgattgaagtggacgcgccgattaccgtatcgctgcaggaactc
gattatgcaggacgaaatgaagaggaagtcattcagttatacaaagagctgcaattcaaa
tccttgcttgaaaaaatggatgcgcctgtcgaagttgagccgctggaagaaattggcgtt
caccacgtggaagaaatcacttcggatatgttaacagacacaatggcgctgcatgtggaa
atcgatggagaaaactatttgtctggagacgttttaggcatcggcctgtcgaatgacgag
cagacgtattttatttcgacggagctggctgcttcttccggcgtctttaaaaagtggatt
gaagatcacgggacccgtaaatatgtctctgattccaagtctgcctatgcggcaattgcg
cggctcggcctagagcttgctggcatagactttgatttgatgctggctgcgtacatcgtc
aatccttcattctcgacaaatgaagtatctgagatcgcacggtcattcggctatcatggc
gttgaaaatgatgaaacagtctacggcaaaggagctaaacgttcattgccggcagcggaa
caactggccaatcatacggcaagaaaagcgcatgccgtctgggagctgtatccggtcatt
acaaaacaattagaggataatgagcagcgggacttattccatgatctcgaactgccattg
gcaaagatacttggaaaaatggaagtgacgggcgtcagaacagatgtggatgtattgcgc
tcaattggtgaagagttatcagaacgtctggcagtcattgagaaaacgatttatgaaatg
gcgggcgagaagtttaatattaattcacctaagcaattgggtgttatattatttgaaaaa
atcggcctgacaccgatcaagaaaacgaaaacaggttactccacagctgccgatgtgctc
gagaagcttgaaagtgaacatgaaattatccagcatattttattatatcggcagctcgga
aaattgaattccacatatatcgaaggtctgacgaaagaaattcatgaagacggaaaaatt
catacccggttccagcaggcgctgactcagacaggaagattgagttccatcaatcccaac
ttgcaaaatatcccgatccgtttggaagaaggaagaaaaatacgcgcggcgttcataccg
tctgaaaaagactggattatgttcgcggcggattactcgcaaatcgaattgcgtgtgctt
gcgcatatttcacaggacgaaaagttaatcgaagcgttccgtcaaggcgcagatattcat
acgaaaacggcgatggatgtatttggcgtcaaagaagacgaagtggacgggaatatgagg
cgtgcggcaaaagcggtcaactttggaattgtttatggaatcagcgactatggattatca
caaagtttaaatattacgcgcaaagaagcaggggaattcattgacacgtatttggcaagc
ttcccgggcgtaaagcaatatatggataacagtattactgatgcaaaacaaaaagggtat
gtaacgactctgctgaagcgccgccgttatttgcctgatatcacaagctccaatttcaat
ttgcgcggatttgcggagcgcactgccatgaacacaccgattcaggggacagctgcagat
atcattaaacaggcaatgattgatatggatgcacgacttgaagaagaaaatttgcaggcc
cgtatgctgctgcaagtgcatgatgagctgatttttgaagcgcctatggaagaactggag
aagttaaaagaaatcgtaccggaagtcatggagcagacgattcaactggacgttccattg
aaagtcgattggaattatggcaagtcctggtacgaaacaaagtga
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