Sporosarcina sp. P33: SporoP33_03000
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Entry
SporoP33_03000 CDS
T04790
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spor
Sporosarcina sp. P33
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spor03016
]
SporoP33_03000
Enzymes [BR:
spor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SporoP33_03000
Transfer RNA biogenesis [BR:
spor03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SporoP33_03000
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ARD47322
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All DBs
Position
633735..634358
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AA seq
207 aa
AA seq
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MLIILSFQAYFSECKGNYSLGGELELAQHYFIGISISHPIHGVVRQLRSEYQLHDKYKVL
PHEKDLHMTMRYIGELDEAKISWLTSSLRKISQSHTSFTVYVKGLSFFGSSTGPRVVYLS
VQSSSALCDLQSQIARRTEKILELERDDRFVPHITIAKKRKTKEKMQLEKKLIDPVPVLI
EEFTLFRIHPNEQPSYEEFARFPLKKS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgttaattattttatcattccaggcatatttttctgaatgtaagggaaactattcatta
ggaggtgagctggaattggcacaacattattttatcggcatctctatctctcatccgatt
cacggggttgtccggcaattacgcagcgaataccaactgcatgacaaatacaaagtactt
ccccacgaaaaagatttgcacatgaccatgcgctatattggggaactcgatgaagccaaa
atatcatggctaacgtcttccttgcgtaaaatttcacagtctcatacatcctttacagtg
tatgtcaaaggactatcatttttcggatcatctaccggaccgcgcgtcgtctatttatct
gttcaatcctccagcgcactttgcgatttacaatcacagattgcaaggcggacggaaaag
atactcgagctggaaagagatgaccggttcgttccgcatattacgatagcgaaaaaacga
aagacaaaagaaaagatgcagttagaaaaaaagctcattgacccagtgcctgtgttaata
gaagaatttacgttattcaggattcacccaaatgaacagccttcctatgaagagttcgcc
cgttttccattaaaaaagagctga
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