Sporosarcina sp. P33: SporoP33_04985
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Entry
SporoP33_04985 CDS
T04790
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spor
Sporosarcina sp. P33
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spor03019
]
SporoP33_04985
Messenger RNA biogenesis [BR:
spor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SporoP33_04985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ARD47657
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All DBs
Position
complement(994895..995833)
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AA seq
312 aa
AA seq
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MKKLMEHQVGESVDMYLLIKQATKGVTQQGSPFMTLILQDKSGDLEAKLWDTGEEQAQMY
QGATIVKVGGEVHEYRGKNQLRIKAIRPVKEDEGVSIADLVPSAEKSKEVLLDELMQFFF
EMKNPQIQRITRHLLKKHQQKFVLYPAATRNHHDYVSGLLDHVVSMLKLGKAIAELYPTL
NKDLLYAGIILHDIGKVIELSGPVGTQYTIEGNLLGHITIMVNEIAKAAEELEIEGEELM
LLQHMVLSHHGKEEWGSPKRPMLKEAEILHYIDNIDAKMNMLNRVMSKTAPGEFSERVFP
LDNRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttatggaacaccaagtcggcgaatctgttgacatgtatttattaattaag
caggcaacaaaaggtgtcacgcagcaggggagtccgttcatgacattgattctccaggat
aaaagcggggatcttgaagcgaaactttgggatacaggtgaagagcaggcgcaaatgtac
caaggcgcaacgattgtaaaagtaggcggggaagttcatgaataccgcggcaagaaccaa
ttgcgcattaaagcgatccgtccggtcaaagaagatgaaggcgtatccatcgcagattta
gtcccgtctgctgaaaaaagcaaggaagtgctgctcgatgaactgatgcagtttttcttt
gagatgaaaaacccgcaaattcagcgcataacgcgccatttgctgaaaaaacatcagcag
aaattcgtgctctatccggcggcaacaagaaaccaccacgactatgtgtccggtttgctt
gatcatgtggtgtcgatgctgaaacttggcaaggcgattgcggagctgtatccgacgttg
aataaggatttactgtatgccggaatcatcttgcatgatatcgggaaggtcattgagctg
tcaggcccagtcggcacgcagtacacgatcgaaggaaatctgctcggccatattacgatt
atggtcaatgaaattgctaaggccgcagaggagctggagattgagggcgaggaattgatg
ctgcttcagcatatggtgctgtctcaccacgggaaagaggagtggggaagtccgaagcgt
ccgatgctgaaggaggcggagattcttcattatatcgataatatagatgcgaagatgaat
atgctgaaccgtgtaatgtcgaagactgcgccgggtgagttctcggagcgtgtcttcccg
ctggataaccgttcgttttataagcctacgtttgaataa
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