Sporosarcina sp. P33: SporoP33_05970
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Entry
SporoP33_05970 CDS
T04790
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spor
Sporosarcina sp. P33
Pathway
spor03420
Nucleotide excision repair
spor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SporoP33_05970
03430 Mismatch repair
SporoP33_05970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_05970
Enzymes [BR:
spor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP33_05970
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SporoP33_05970
MMR (mismatch excision repair)
Other MMR factors
SporoP33_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
NAD_binding_10
IZUMO
Staph_reg_Sar_Rot
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARD47815
LinkDB
All DBs
Position
complement(1188135..1190369)
Genome browser
AA seq
744 aa
AA seq
DB search
MNKLSEDLLKGMNPEQARAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEKQVYPSNIL
ALTFTNKAAREMRDRIDGLLGAGSGERMWVSTFHSMCVRILRREVDRIGLSKNFTILDSA
DQLTAMKRVLKELNLDPKQNDPRAMLGIISNAKNECIDAAEFRKNANPQNPHERTVADIY
ERYTKKLRQNQSMDFDDLIMMTIVLFERVPEVLEFYQNKFQYIHVDEYQDTNNAQYRLVK
MLASKFRNICVVGDSDQSIYRWRGADIGNILSFEKDYKEANVILLEQNYRSTKRILQAAN
EVITNNKSRYDKKLRTENPEGELISIYKARDEKDESQFVVQQIIELKEELGLTLDQFAIL
YRTNAQSRLIEEYLLKSNLDYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLAFARIINE
PKRSIGATSFERMATFALQNDRSIFDSLQEVDFMGLPKKALTEAVKFRELIDGFSQMQEF
LSVTELVKEVIEKSGYRDMLENEKSIEAESRLENIEEFLSVTEAFEKRAEEEDEEPTLIA
FLTDLALVADIDALDNEENSSAEKIVLMTMHAAKGLEFPVVFVIGMEENIFPHIRALADP
EEMEEERRLAYVAITRAEQRLYLTCAGYRMLFGKSNFNSPSRFLNEISEELTELLADGNG
MSVPFAQAPKPKARRPAVKRPAYNESGGEKMQWKPGDKASHKIWGTGTVVSVKGSADDME
LDIAFPNPVGIKRLLAKFAPIEKE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactatcagaggatttactgaaaggcatgaatcccgaacaggcacgtgccgtt
aagacaacagaagggccattgctcataatggcgggtgcaggttcaggaaagacccgtgta
ttgacacaccgaattgcttacttagtagtggaaaaacaagtgtacccttccaatatactg
gcgcttacttttaccaacaaagcagcacgtgagatgcgcgaccgaatcgacggattgctt
ggggcaggctcaggagaacgtatgtgggtttcgacatttcactccatgtgtgtacggata
cttcgcagagaagttgaccgtatcggcttatccaaaaactttactattttagacagtgcc
gatcagctgactgcgatgaaacgtgttttgaaagaactgaaccttgacccgaaacaaaat
gacccgcgtgcgatgctcggcatcatcagcaatgcaaaaaacgaatgtattgacgcggcg
gaattccggaaaaatgccaaccctcaaaatccgcatgaacggacagtggcggatatttat
gagcgctacacgaaaaaactgcgtcaaaatcagtcaatggatttcgatgatctgattatg
atgacgatcgtgctgtttgaacgcgttccggaagtactggaattttatcaaaataaattt
cagtatattcacgtcgatgaataccaggatacaaataatgcgcagtatcgtctcgtcaag
atgctggcatcgaagttccgtaacatctgtgtagtaggtgactccgatcagtccatctac
cgctggcgtggagcggacatcggcaatatcctgtcctttgagaaagattacaaagaagcg
aatgtcattttactggagcagaattaccgttccacgaagcggattttacaggcggcaaat
gaagtcatcactaataataaaagccgctatgacaagaaattacgcacagaaaatccggaa
ggcgaattaatttctatttataaagcgcgcgatgaaaaagatgagtcacaattcgtcgtt
cagcaaataattgaattaaaagaagaactgggattaacgctcgatcaatttgcgatactg
tatcgtaccaacgcgcaatcccgtctcattgaagaatatttactgaaatcaaatctggat
tatacaattgttggcggcacgaagttctatgaccgaaaagagattaaagatctgctggcc
tatttacggctaattgccaataatgacgatgatcttgcgtttgcccgaattatcaatgaa
ccaaaacgcagcattggggccacatcatttgaacgaatggcaacttttgcattgcaaaat
gaccgttcgatattcgattcattgcaggaagtcgatttcatgggcttgccgaaaaaagcg
ctgacagaagcagtgaaattccgtgaactcatcgacggattttcccagatgcaggaattt
ttatctgtcacggaattggtaaaagaagttattgaaaaatcgggttaccgcgatatgctg
gaaaatgaaaaatcgatcgaagcagaaagccgtcttgaaaatatcgaggaatttttatcg
gtgacagaagcattcgaaaagcgggcagaggaagaagacgaagagcctacactcattgca
ttcctgacagatcttgcactggtcgcggatattgatgcgctggataatgaagagaactct
tctgctgaaaagatcgtcctaatgacgatgcacgcagctaaaggtcttgaattcccggtc
gtctttgttatcggcatggaagaaaatatattcccgcatattcgggcgcttgctgatccg
gaagaaatggaagaagagcgcagattggcctatgttgcaattacacgtgcggaacagcgc
ctgtacttgacttgcgcaggctaccgtatgctgtttggtaagtcgaacttcaattcaccg
tcccgtttcctaaatgaaatttcagaagaactgacagaactgctcgcagacggcaacggt
atgagcgtaccatttgctcaagcgccaaaaccaaaagcaagacgtccagcagttaagcgt
cctgcttataatgaatctggcggagagaaaatgcagtggaaaccaggcgacaaagcttcc
cataagatatggggaaccggcacagtagtaagtgtcaagggcagtgcggatgatatggag
ctggacattgcctttccgaatccggtcggcattaaacggctgctggctaaatttgcaccg
attgaaaaagaataa
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