Sporosarcina sp. P33: SporoP33_11435
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Entry
SporoP33_11435 CDS
T04790
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spor
Sporosarcina sp. P33
Pathway
spor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP33_11435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spor03021
]
SporoP33_11435
03019 Messenger RNA biogenesis [BR:
spor03019
]
SporoP33_11435
Transcription machinery [BR:
spor03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SporoP33_11435
Messenger RNA biogenesis [BR:
spor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SporoP33_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
NACHT
AAA_25
AAA
AAA_22
NB-ARC
Spore_III_AA
AAA_14
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ARD48774
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All DBs
Position
2311615..2312895
Genome browser
AA seq
426 aa
AA seq
DB search
MTMITLADLENMTLKELYSLAKQFKITNYSKLTKKELIFAILKSRAEQEGFFFMEGVLEI
IQSEGYGFLRPINYSSSSEDIYISASQIRRFDLRNGDKVTGKVRPPKENERYYGLLQVEA
VNGQNPEVARERVHFPALTPLYPDRQIKLETAKNNISTRIMDLVSPVGFGQRGLIVAPPK
AGKTTLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPQNHVK
VAELVLERAMRLVESKRDVIILMDSITRLARAFNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALIETGSRMDEVIYEEFKGTGNMELHLDRSLAERRIFPALDIR
RSGTRKEELLIPKANLDRLWAIRKTFSDSQDFTERFMRKLRQSENNDEFFDKLNEEMKSK
KGKGLI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgattactcttgccgacctcgagaacatgacgctcaaggagctgtattctctc
gcgaagcaatttaaaatcaccaactatagcaaactgacgaagaaagaattaatctttgct
atattgaaatctcgcgccgaacaagaaggtttctttttcatggaaggcgttctcgaaatt
attcaatcagaaggatacggtttcctgcgtccgatcaattactcatccagttcggaagat
atctacatttccgcatcccaaattcgccgattcgatttgcgtaatggcgataaagtaaca
ggaaaagtccggccgccaaaagaaaatgagcggtactatggcttgctgcaagtggaagcc
gtcaacggtcaaaatccggaagtggcacgcgagcgcgtacattttcccgccctgacacct
ttatatccggaccgtcaaatcaaattagaaacagctaaaaataatatctccacacgcatc
atggatctcgtatcgcctgtcggtttcggacagcgcggattaattgtcgcaccgccaaaa
gcgggaaaaacaacgctgctgaaagaaatcgccaactcgatcacgacgaatcatccggaa
gcggaattaattgtgctgttaatcgacgaacgtccggaagaagtaacagacatcgaacgt
tctgtaaaagcagacgttgtcagttccacatttgacgaagtgccgcaaaatcatgtaaaa
gtggcagaactggtacttgaacgcgcaatgcgtcttgtcgaaagtaaacgcgacgtcatc
atcctgatggattccattactcgtttggcacgtgcattcaacctggtcatcccgccaagc
ggccggacactttccgggggaatcgatccggcggctttccatcgccctaaacgatttttt
ggtgctgcgcgtaatattgaagaaggcggcagcttaacgatcctggccacagcgcttatt
gaaacaggctctcgtatggacgaagtcatctacgaagaattcaagggaaccggcaacatg
gaactgcaccttgaccgcagcctggctgaacgcagaatcttccctgcactcgatatccgc
cgatcaggtacaagaaaagaagagctgctcatcccgaaagcaaatctggacagactatgg
gcgatcagaaaaaccttctcagactcccaggatttcaccgagcgcttcatgagaaaactt
cggcaatctgagaacaacgatgaatttttcgataagctgaatgaagaaatgaaaagtaag
aagggcaagggactgatctga
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