Sporosarcina sp. P33: SporoP33_13190
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Entry
SporoP33_13190 CDS
T04790
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spor
Sporosarcina sp. P33
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_13190
Enzymes [BR:
spor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP33_13190
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SporoP33_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_22
AAA_16
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ARD49097
LinkDB
All DBs
Position
2719602..2723093
Genome browser
AA seq
1163 aa
AA seq
DB search
MSLRFVTGRSGTGKTTFIEQEIAEELKERPMGPPIVIIVPDQQSYSMEYSLSVTRGLSGM
IRAQVLTFKRLAWRVLQEVGGITREEVDSFGYRMLVRSVLEENKDSFKLFKQAASKHGFA
EQVSDIMKEFSKYCIDRQAFAELTGSLAAKDASRILQDKAHDLQLLLEKIEERLGTTYMD
SEGQLNALAEQLPHTEWLQDASIYIDGFGDFTTQEYNIITQLMKYTKRVTVVLPMEEKLH
SGEHELFHTAEQQYETLQQLAYSETVEREERVHLTEPQRFANQELAHLEEQFDRYPPEAC
EATGAIHLIEATNRRAEVHAVARSIRKMMREGKRYRGMTVLYRQPDAYDELIQNIFTQYD
IPVFISQKKPMLHHPLIEFVRSLLEAVRTDWSYEAVFRAVKTDLFFPANESKQVWRERAD
RLENFVLAKGIHGTSRWNDEERWKVSRYRGLEKVRTVQTDEELAIQAEFAETRDLIRTPL
MELQQKLKAAVTGRDVAEALFVTLESLNVYDKIIELQQAEHMNNRLQAAAEHEQAWTSWI
NVLDQFVLMFGDKELPIAESIKILDEGFDTLEFKLIPPSLDQVTVTTVELFNSMDVEAVF
VLGANEGVLPLRNDHEGLLSDGDRELFSELGITLAPTTKLQLMRESFMAYRAFTGASQRL
TVSYPVADEEGKALIPSLYIPRLQQIVSNIPLETAVIEPTELSEVEDKLTYIEHPEVALS
YAIRMMREASAHEEIEPEWQAVLAYYTEDPLWSSIIQSIVQPALKRQKTELLEPELTAGL
YGSSFTTSVSRIESYYSCPFQHFTTYGLGLQERFEFQLEAPDIGDLFHAALKWVSDEVMR
QGLSWAALTKEQCWQLGRDAIDALAPKFFHRILLSSQRYAYIQRKLMQIIQRTIRALQSQ
ARNSRFTPIAIEAGFGPNEEIAPLEINLKNGRHMHIRGRIDRIDTMKKDDQTFLRVVDYK
SSARALDLTEVYYGLSLQMLTYLDVALEHAEDWLGVYANPAGVLYMYVHNPMLRMTKELT
EEAVEKELLKSYKMQGYIIEDAEVALGMDDRLESESLIIPARLKKDGTFYSTSKVVPPED
INMMRSFVRKRHQQAGDGMLSGDTRVYPYRLKEHMPCTFCSYQSICQFDKTDPTQPTRNY
TAFKPEESLEKMRKEIDPDANSR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcgttttgttacaggtcgctccggtacagggaagacgacttttattgaacag
gaaattgcagaagagctgaaggagcggccgatggggcctcctatcgtaatcatcgtgccc
gaccagcagtcatactcgatggaatacagcctgtccgtcacacgcggactgtccgggatg
atccgtgcgcaagtgctgacgttcaaacgccttgcgtggcgcgtgctgcaggaagtgggc
ggcatcacgcgggaagaagtcgacagcttcggctaccgcatgctcgtgcgcagcgtgctc
gaagaaaacaaagactcgttcaaactgtttaagcaggcggcctctaaacatggattcgcc
gagcaagtcagcgacatcatgaaagaattcagcaaatactgcatcgaccggcaggcgttt
gccgaactgaccggctcgctggcagccaaagatgcatcgagaattttgcaggacaaagcg
catgacctgcagctgctgcttgagaaaattgaagaacgtcttggaacgacctatatggac
agcgaagggcagctcaacgcccttgctgaacagttgccgcatacggagtggctgcaggat
gcatcaatctatattgacggtttcggagactttacgacacaggaatacaacatcattaca
caattaatgaaatatacgaaacgtgtcacggttgtgctgccgatggaagaaaagctccac
agcggagagcatgaactgttccatacagcagaacagcaatacgaaacgctgcagcagctc
gcatacagtgaaactgttgagcgcgaggaacgggttcatctgacggaaccgcagcgcttt
gcgaaccaggaacttgcacatctggaagaacagttcgatcgttacccgcccgaagcgtgt
gaagcgacgggcgctattcatctgattgaagcgacgaaccggcgggcggaagtgcatgcg
gtggcgcggtcgattcggaaaatgatgcgtgaaggcaagcgctaccggggaatgacggta
ttgtaccggcagccagatgcgtatgacgaattgattcaaaatatttttacgcaatatgat
atccctgttttcatcagtcagaaaaaaccgatgctgcatcatccgctcatcgaattcgtt
cgttcattgctggaggcggtgcgcacggactggtcgtatgaagcggtgtttcgtgcagta
aagacggatctctttttccctgccaatgaaagcaaacaagtgtggagggaacgggctgac
cgcctggagaattttgtgctggcaaaaggaattcacggcacttcacgctggaacgatgaa
gaacgctggaaagtcagccgttaccggggactggaaaaggttcgcactgtgcagaccgat
gaagagctcgcgatacaggcggagtttgcggagacccgggatttgatccgcacgccgctg
atggaactgcagcagaaactgaaagcggcggtgaccgggcgggatgtcgcggaggcattg
tttgtcacgctggaatcattgaacgtctacgataaaatcattgagctgcagcaggcggaa
catatgaataaccggctgcaggcggctgcagagcacgaacaggcatggaccagctggatc
aatgtgctcgatcagtttgtgctgatgtttggagacaaggaacttccgattgcggaatcg
atcaaaattctcgatgaaggattcgatacgctggaatttaaactcattccgccgtcactc
gaccaagtgaccgtgacgacagtggagctgtttaattccatggacgtggaggccgtgttt
gtgctcggtgcgaatgaaggggtactgcctctccgcaatgatcacgaaggattattatca
gacggtgaccgggaattattcagtgaacttggcattacgctggcaccgactaccaagctt
cagcttatgcgcgaatcgtttatggcgtaccgtgcgttcacaggagcgagtcagcggctg
acagtcagttatccggttgcggacgaagagggaaaggcgctcataccgtcgctttacatt
ccgaggctgcagcagattgtatcgaatataccgcttgaaacagcagttattgagccgacc
gaactgtcagaagttgaagataagctgacgtatattgagcacccggaagtggcgctgtct
tacgcgatccgcatgatgcgtgaagcttctgcccatgaggaaatcgaacctgaatggcag
gcggtccttgcatattatactgaagatccgctctggtcatcgattatccagtcgattgtg
cagcctgctttaaaacgccagaaaacagagctgctggagccggaattgacagccggttta
tatggttcttcgtttacaacgagtgtatcgcggatcgaatcgtattacagctgtccgttc
cagcatttcacgacatacgggcttggcttgcaggagcgttttgaatttcagctggaagcc
ccggatatcggggatttattccacgcggcgctgaaatgggtgtctgatgaagtgatgcgc
caggggctttcctgggctgcgctgacgaaagaacagtgctggcagctgggccgggatgcg
attgatgcattagcgccgaagtttttccaccgtattttactgtcgagccagcgctatgca
tatatccaaagaaaattgatgcaaattattcagcggacgatccgcgcactgcagtcacag
gcgcgcaattcaagatttacgccgattgcgattgaagcagggtttggtccgaatgaagaa
atcgcgccgcttgaaattaatttgaaaaacggccggcatatgcatattagaggacgaatt
gaccgcattgacacaatgaaaaaagatgatcagacgtttctgcgtgtagtggattataaa
tcttcagcacgggcgctcgatttgacggaagtgtattacggtttgtcgctgcaaatgctg
acttatctcgatgttgcgcttgagcatgcggaagactggctcggtgtgtatgcgaatccg
gcaggggtgctgtatatgtatgtgcacaatccgatgctgcgcatgacgaaagagctgacc
gaagaagcggtggaaaaagaattgcttaaatcctataaaatgcaaggctatattattgaa
gacgctgaagtggcgcttggcatggacgacagactggaaagtgagtcacttattattccg
gcgcgcctgaaaaaagacgggacgttttattcgacgtcgaaagtagtgccgcctgaagat
attaatatgatgcgttcatttgtccggaaaaggcatcagcaggcgggcgacggaatgctg
tcaggcgatacgcgcgtatatccgtaccggctgaaagaacatatgccatgtacgttctgt
tcgtatcagtccatctgtcagttcgacaagacggatccgacacagccgacgcggaattat
acggcgttcaagcccgaagaatcattagaaaagatgcggaaggagatagatccagatgcg
aattccagataa
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integrated database retrieval system
