Sporosarcina sp. P33: SporoP33_13195
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Entry
SporoP33_13195 CDS
T04790
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spor
Sporosarcina sp. P33
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_13195
Enzymes [BR:
spor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP33_13195
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SporoP33_13195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
CtsR_C
DUF2059
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARD49098
LinkDB
All DBs
Position
2723077..2726778
Genome browser
AA seq
1233 aa
AA seq
DB search
MRIPDKPPHETFTDDQWRAIHASGKDILVSAAAGSGKTKVLITRMIEKVLNTENPIDVDQ
LLVVTFTNAAAAEMRHRMASALEEAIINDPSSVHLRRQLNLLNKAQISSLHSFCLQVVRQ
YSYVLDIDPGFRIADATEASILRDDTIALVLEDAYSQADPEAIYRLSDSFTADRNDQAIE
TLIDKLYDYSRVHPNPSQWLALIPQQYEIGDDATIDGLSFIDSLKLSIRHTLEEAKTVTR
DLQRVAEMNEGPLPLQETAKADEAWIDGALHHMLHGTWEEAFTYFQTLKWVKAGTIKKDT
CDEELAARGKAMRDQVKKIVNALKDTYFTRTPARLLEEIRLMAPLMHTLVGLVEDFAVRY
QKVKEERGLVDFSDLEHYALQILSKEGELAPSDIAIDYRNRFAEVLVDEYQDTNFLQEAI
LQLIKQGGEADGNLFMVGDVKQSIYRFRLAEPGLFLGKYGRFTEDVQQQGLKIDLNANFR
SRKEVLDATNFIFRQIMGTRVGEIEYDEAAALKYGAQYPEKEVAAGLTILYENEEEEDLS
EEQEAQQELKKSQVEARAIAQKINAWKDSQAQVSDAFSGKQRPLEYRDIVILMRSMTWSG
EIADELKAAGIPVYVELSSGYFDAIEVMIMLNTLRVIDNPYQDIPLVSVLRAPFVGLTEN
ELAQIRLVNRNVSFYEAVQTFMQTGGAGIHSAAQEKLQRFFLLLEDWRNMARHGSLSELI
WQVYQDTYYYEMVGILPNGKQRQANLRALHDRAMMYEKTSFRGLFRFLRFIDRMRKRGDD
LGEARFMSEKENVVRIMTIHSSKGLEFPYVFLAGMGRPFNKMDFHNPYLFDQHFGLAVKA
IDPDKRIMFTSLPFLAIKEKKELEMRAEEMRVLYVAMTRAKEHLELIASVKDIEKTITQW
QEAQLLDESEPLPEYKRSRAAGYLDWIGPAVARHIDFMKFGKTAGGELMDDASKWEVNAY
PFSAFRSTEETGFDDWLPVDQEAAVADPELTEVVRSRFDAQYPHEAAVGMSSKQSVSELK
RIALLELERGDADPFEELETDAAKRMTNLHARPSFLQQRSLTKAEIGTAMHTVMQHLDLK
NELNQESAAQFVRQLETRELLTKEEAAAIDVQAIAEFFHTPLGQRMKQADQVLREMPFTY
AHRAAEGEYQLLQGIADCLFHEDGEWVLVDYKTDDVSKFYSDKAIANEMQIRYGTQLNLY
KNVLESILSIEIKEMLLYLFSEAKTISLQEELV
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattccagataagccgccgcatgagacgttcacggacgaccaatggagggcgatc
catgcgtccggcaaagatatcctcgtgtctgcggctgcaggttcggggaaaacaaaagtc
cttattacgcggatgatagaaaaagtattgaatacggaaaatccgatcgatgtcgatcag
ctgctcgttgtcacatttacaaatgcggccgctgcagagatgcgccaccggatggccagt
gcacttgaagaagcgatcattaatgatccgtcttctgttcatttgcgcagacagttgaat
ctgctgaataaagcacaaatttcttctttgcactcgttctgcctgcaagtcgtgcggcaa
tactcgtatgtgcttgatattgatcctggattccggattgccgatgcaacagaagcatcg
attctgcgtgacgatacgattgcactcgtgcttgaggacgcatacagccaggcagatcca
gaggcaatttatcgtctgagcgacagttttacggcggaccggaacgaccaggcaattgaa
acactgatagacaagctctatgactattcacgcgtgcacccgaatccttcgcagtggctg
gcactcattcctcagcagtatgaaattggagacgatgcgacaattgacggtctgtcattt
attgattcactgaaactttcgatccgtcatacgctcgaagaagcgaaaacggttacgcgg
gatctccagcgggtggcggaaatgaatgaagggccgctgccgctgcaggagaccgctaaa
gcggatgaagcctggattgacggggcgcttcatcatatgcttcacggcacatgggaagag
gcttttacgtatttccagacgctgaaatgggtgaaagcgggcacgattaagaaagacact
tgtgatgaagaactggcggcacgcggcaaagcgatgcgcgatcaggtgaagaaaatcgtc
aatgcattaaaagatacgtattttacgagaacacctgccaggctgctggaagaaatccgc
ctgatggcaccgctcatgcatacgctggtcggacttgtcgaagattttgccgtgcgttat
caaaaggtaaaggaagagcgcggtttagtggatttctctgatttggagcattatgcgctg
cagattttatctaaagaaggggaactcgcaccttctgatattgcgattgactaccggaac
cgctttgcggaagtgcttgtcgatgagtaccaggacacgaacttcttgcaggaagcaatt
ttgcagctaatcaagcagggcggtgaagcggacgggaatttgtttatggttggggatgtt
aagcagtcgatctatcgcttccgtctcgcagaaccggggctctttttaggcaagtatggc
cgatttacagaagatgtgcagcagcaggggctgaaaatcgatttaaacgccaatttccgg
agccgcaaggaagtgctcgacgcaacgaacttcattttcaggcaaatcatggggacacgc
gtcggtgaaattgaatatgacgaagcggcggcgctgaagtacggcgcgcaatatcctgaa
aaagaagtggcggcaggactgacgatactttatgaaaatgaagaggaagaagatctgtcg
gaagagcaggaagcgcagcaggagctgaagaaatcccaagtggaggcacgtgccattgcg
cagaaaatcaacgcgtggaaagacagtcaggcacaggtgtcagatgccttcagcggaaag
cagcgtccgcttgagtaccgcgatatcgtcattctcatgcgttcgatgacatggtcggga
gaaattgcggatgaactgaaagcggcgggcattcctgtctatgtggaattatcgtccggc
tattttgacgccattgaagtgatgatcatgctgaatactttgcgggtgattgataatccg
tatcaggatattccgctcgtttccgttctgcgggcaccgtttgtcggtctaacggaaaat
gaacttgcgcagatccgtctggtaaaccggaatgtatcgttttacgaggcagtgcagaca
tttatgcagacaggcggcgccggcattcattctgctgcacaggaaaaactgcagcgtttt
ttcctgctcctggaagactggcgcaatatggcccggcacggatcgctgtcagaattaatt
tggcaagtgtatcaagatacgtattactacgaaatggtcggaattctgccaaacggcaaa
cagcgacaggcgaatttgcgtgcgctgcatgaccgggcaatgatgtatgaaaaaacttca
ttccgcggtctgttccgcttccttcgtttcatcgaccgcatgcgtaaacgcggtgatgat
ctcggagaagcgcgttttatgagcgaaaaggaaaacgtcgttcgcatcatgacgatccac
tcgtccaaagggcttgagttcccgtatgtatttttagccggcatggggcgtcctttcaat
aagatggacttccataatccgtatctgttcgatcagcacttcggcctggctgtcaaagcg
attgatcctgacaagcgaatcatgttcacctctttgccgttcctcgcgatcaaagagaag
aaagagctcgagatgcgtgcagaagagatgcgggtgctctacgtggccatgacgcgagct
aaagagcatctggagctgatcgcatcggtcaaagatattgaaaaaacgatcacgcagtgg
caggaagcacagctgcttgatgaatcagagccgctgcctgaatataaacgttcaagggcg
gccggttatcttgactggatcggtcccgcagttgcgcgccatatcgacttcatgaagttc
ggcaagacagcgggcggggaactgatggatgatgcatcgaagtgggaagtcaacgcgtat
ccattttccgcgttccgcagcacagaggagaccggatttgatgactggctgccggttgat
caggaagcggcagtggcggatccggaactgacggaagtagtgcgcagccgttttgacgcg
caatatccgcatgaggctgcggtcggcatgtcatctaaacagtccgtcagcgaattgaaa
cggattgcattgctggagctcgaacgcggagacgccgatccgtttgaagagctggagacg
gatgctgcaaaacgcatgacaaatcttcatgcacgcccttcctttttacagcagcgctcg
ctgacaaaagctgagattggtacggcgatgcatacggtcatgcagcatcttgacttgaag
aatgaacttaatcaggaaagtgccgcacaatttgtccggcagctggaaacacgtgagctg
ctgacgaaagaagaagcggcagccatcgacgtgcaggcaattgcggagtttttccatacg
ccgctcggtcagcggatgaagcaggccgaccaagttctgcgtgagatgccgttcacatat
gctcaccgcgctgcagaaggcgagtatcagctgctgcaggggattgcggactgcttattc
catgaagacggcgagtgggtgcttgtcgattataaaacagatgacgtcagtaagttttat
tctgacaaggcgattgccaatgaaatgcaaatccgttacggcacgcagctgaatctgtat
aagaacgtgctggaatccattctgtcgattgaaataaaagaaatgctcctgtatttattc
agcgaggcaaaaactattagcttacaggaggaattagtttga
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