Sporosarcina sp. P33: SporoP33_14210
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Entry
SporoP33_14210 CDS
T04790
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spor
Sporosarcina sp. P33
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spor03032
]
SporoP33_14210
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_14210
Enzymes [BR:
spor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SporoP33_14210
DNA replication proteins [BR:
spor03032
]
Prokaryotic type
DNA Topoisomerases
SporoP33_14210
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SporoP33_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
DUF2996
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ARD49284
LinkDB
All DBs
Position
2931125..2933200
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVSASLGHLRDLPRSQMGVDTENNYEPKYITIRGK
GPILQELKKDAKKAKKIFLAADPDREGEAIAWHLSHQLGVDTESDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDREN
EINAFEPEEYWSITSQFTKADKTFEAAFYGNASEKLKLTNQEQVEKIIDSLQSDEFEVSK
VVKKERRRNPALPFTTSSLQQEAARKLNFRAKKTMMMAQQLYEGIAIGKEGTVGLITYMR
TDSTRISDSAKEEVKSFIHTMYGEEFISTSTKKTKAKANTQDAHEAVRPTSAMRPPDAMK
AFLSRDQYRLYKLIWERFVASQMAPAVLDTVTADFLNNDIRFRASGSQVKFPGFMKVYIE
GSDDQQEEKENILPPLEEGEKVKFAEVDPKQHFTQPPPRYSEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVTLDAKRFIPTELGGIVHQAVNQYFPDIIDIEFTRQMEQRLDHVEEGT
IEWRKVIDEFYREFEKHVEVADAEMEKIEIKDEPAGEDCEKCGSPMVYKMGRYGKFMACS
NFPDCRNTKAIIKPIGVTCPKCKEGEVVERKSKTKRIFFGCDQYPECDYVSWDKPISRPC
PKCQHTLVEKRLKKGVQIQCTECDYKEETQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattacttagtaattgtggaatcgcctgctaaagcgaaaacgattgaacgttac
ttaggaaaaaagtataaagttagtgcctcgctggggcatttacgtgatttaccccgcagt
caaatgggtgtagatactgagaataattatgagccgaagtatattacgatccgaggcaaa
ggaccgatacttcaagagttgaagaaggatgcaaaaaaagcgaagaaaatatttctcgcg
gctgacccggatcgtgaaggggaagcaattgcatggcatttatcgcatcagctgggtgtg
gataccgaatctgactgccgcgtagttttcaatgaaattacaaaagacgctattaaagaa
tcatttaaacatccccgtccgatcaatatggatttagtcgatgcacaacaggcacggcgt
attcttgacaggctagtagggtataacatcagcccgattctctggaagaaagtaaaaaag
ggcttatctgcaggacgcgtgcaatcagtcgcacttcgattaattattgaccgcgagaat
gaaattaacgcgtttgaaccagaagaatactggtccatcacgtcccagttcacaaaggct
gataaaacttttgaagcggcattttacggcaatgcttcagaaaagttgaagctgacaaac
caggaacaagtggaaaaaatcattgattcattgcagtcagatgaatttgaagtgtctaag
gtagtgaagaaagaacgcagacgtaatccggcattgccgttcactacatcatctctccag
caggaagcagcacgtaagctgaacttccgcgcgaagaagacgatgatgatggcacagcaa
ttatatgaaggaattgcaattggaaaagaaggaacggtcggtttgatcacctatatgcgt
accgattctacacgaatttccgacagtgcgaaagaagaagtgaaatcattcattcatacg
atgtacggggaagagttcatttcaaccagcacgaaaaaaacgaaagcaaaagcgaatacg
caggatgcgcacgaagcagtccggccgacttcagcgatgcgcccgccagacgcgatgaaa
gcgttcttatcaagagatcaatatcggttgtataaattgatttgggagcggtttgtcgca
agccaaatggcgcctgcagtattagataccgtaacagctgatttcctgaacaatgatatt
cgtttcagagcatccgggtcacaggtaaagttcccggggttcatgaaagtgtatattgaa
ggcagtgatgaccagcaagaagagaaagaaaacatcctgccgccgcttgaagaaggcgag
aaagtcaaattcgccgaagtggatccaaaacagcatttcacacagccgccgccaagatac
tctgaggcacgcctggtgaaaacacttgaggaattgggaataggacgtccttccacgtat
gcgccgacgctcgatacgattcaaaagcggggctatgtcacattagatgccaaacggttt
attccgacggagcttggcggtattgtacatcaggcggtcaatcaatatttcccggatatt
atcgacattgaatttacgagacaaatggaacagcgtcttgaccatgtggaagaaggcact
attgaatggcgcaaggtcatcgatgaattctaccgtgaatttgaaaagcacgttgaagta
gctgacgcggaaatggagaaaattgaaataaaagatgagccggcaggcgaagactgcgag
aagtgcggttcgccgatggtttacaaaatgggccgctacggtaaatttatggcatgctcc
aacttccctgactgccgcaacacgaaagcaattatcaaaccaattggtgtcacatgtccg
aaatgtaaagaaggcgaagtcgttgagcggaaaagcaaaacgaaacggatattcttcggc
tgtgaccagtatcccgaatgtgattacgtctcatgggataaacctatttcgagaccttgt
ccgaaatgtcaacatacactggtggagaagcgcctgaaaaaaggtgttcaaatccaatgt
acagaatgtgattataaagaagaaacgcaaagttaa
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