Sporosarcina sp. P33: SporoP33_14455
Help
Entry
SporoP33_14455 CDS
T04790
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
spor
Sporosarcina sp. P33
Pathway
spor03030
DNA replication
spor03430
Mismatch repair
spor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SporoP33_14455 (polC)
03430 Mismatch repair
SporoP33_14455 (polC)
03440 Homologous recombination
SporoP33_14455 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spor03032
]
SporoP33_14455 (polC)
03400 DNA repair and recombination proteins [BR:
spor03400
]
SporoP33_14455 (polC)
Enzymes [BR:
spor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SporoP33_14455 (polC)
DNA replication proteins [BR:
spor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SporoP33_14455 (polC)
DNA repair and recombination proteins [BR:
spor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SporoP33_14455 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn_ribbon_5
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ARD49330
LinkDB
All DBs
Position
2976184..2980491
Genome browser
AA seq
1435 aa
AA seq
DB search
MDAAQKFLTLLQQTGLTDDQLMNYFQNGELNRVTVQKKSRVWKFNITLDEVLPIDVFRFV
QQRVHESFAAIANVHLEMEARNSGVSEELIADYWPLVVGELADISPPMRQCLVEQKPRLH
GEKLMITCSSDLECQTLKNKYIETLSSLYQQFGFPKFMFDVSIVESDKAEEEREQFLKQK
KQEEDVLSKQAYHQLQQRETMKSEQGESDKALILGTPIKAGEAVVPIHEIQDEERRLIIE
GFVFDAEVRELRSGRSLLTLKVTDYTDSILVKMFSRDNEDAEMMKSFKKGMWVRARGGIQ
NDTFVRDLIMMAQDLAVIPSVERKDKAPEGQKRVELHAHTSMSQMDAVVSASALVAQAAK
WGHPAIAITDHANVQSFPEAYNAGKKHGIKVLFGLEANLVDDGVPIVYEEQHRLLETDTY
VVFDVETTGLSAVYDTIIELAAVRVKDGEIIDRFERFANPHHPLSSVTTNLTGITDDMVE
NAPEVEEVMAEFIDFIGDAVLIAHNASFDMGFFYASCKRAKIETIAYPVIDTLELSRFLY
PELRNHRLNTLAKKFDIELTQHHRAIYDTEATAHLFLRLLADTKERGIEWLDDLNKNIGE
GDAYKRSRPSHCTILAADDEGLKNLFKLVSISHMDYFYRVPRIPRSLLVKYRKGLLIGSG
CDKGEVFEGLMQKPMEEVEEIASFYDYLELHPKPVYSHLMELDLIRDEWNLEDIMRKMLK
LGKKTGLPVCATGNVHYLEETDATYRKVLVRSQGGANPMNRHSLPAVHFRTTDEMLKEFE
FLGEEAAKEIVIDNPLKIVERVGDVKPIKDDLYTPKIEGAEEEVRELTYSMARHIYGDTL
PEIIEARIIKELTSIIDNGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMMEITE
VNPMPPHYVCPSCKHSEFFDDGSVGSGYDLPDKACPACGTMFKKDGQDIPFETFLGFAGD
KVPDIDLNFSGEYQAHAHNYTKELFGEDYVFRAGTIGTVAEKTAYGYVRGYMNDNDIQMR
GAEIDRLVQGCSGVKRNTGQHPGGIIVVPDTMDIFDFTPVQFPADDIQSKWRTTHFDFHS
IDNNLLKLDILGHDDPTMIKMLEDLSGIDAKTIPPDDEGVMALFGGTESLGVTEEQIDCK
TGTLGVPEFGTRFVRQMLEETKPSTFSELIQISGLSHGTDVWLGNAQELIQNKTCQLSEV
IGCRDDIMVYLIYQGLEPSLAFKIMESVRKGKGLTPEFEEAMKENKVPAWYISSCKKIKY
MFPKAHAAAYVLMALRIAYFKVHHPIMYYATYFTVRATDFDLVTMSKGSASIRAKIKEIN
AKGLDAPPKEKNLVVVLEIALEMVERGFTMAKPDLYKSDATQFLIEGNKLIPPFNAVPSL
GTNVAKTIVEARKDGEFLSKEDFQKRGRVSKTIVEYLDNLGCLEGMPEANQLSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
gtggatgccgcccaaaagtttttaactttattgcagcagacaggtctgactgatgatcag
ttaatgaattattttcaaaatggtgaattgaaccgagtgactgttcagaagaaatcaaga
gtatggaagttcaatatcacattggatgaagtgttgcccattgacgtattccgcttcgtg
cagcagcgcgtccatgaatcatttgcggcgattgcaaatgtgcatcttgaaatggaagcg
agaaacagcggagtaagtgaagagttaattgcagattattggccgctcgtcgtgggtgaa
ttggcagacatttcaccgcccatgcgccaatgcctagtggaacaaaaaccgagactgcat
ggcgagaaattaatgatcacgtgttcgagtgatctggaatgtcagacgctgaaaaacaaa
tatattgaaacactatcgtcattgtatcagcaattcggatttccaaaatttatgttcgat
gtgtcgattgttgaaagtgataaagcagaagaagagcgcgaacaatttctgaaacagaaa
aaacaagaagaagatgtcctgtcaaaacaggcttaccatcagctgcagcagcgtgaaacg
atgaagagtgagcagggtgagtccgataaagcgctgatccttgggacaccgatcaaggcc
ggtgaggcggtcgtgccgattcatgagatccaggatgaagaacgccggctgatcatcgaa
ggttttgtgtttgacgcggaagtgcgcgaactgcggagcggacgatctttgctgacattg
aaagtgacggattacaccgattcaatattagtgaaaatgttttcacgtgacaacgaagat
gcagaaatgatgaaatcctttaaaaaagggatgtgggtacgcgcaagaggcggtattcaa
aatgatacgttcgtaagggatttaattatgatggcccaggatttggctgttattccatct
gtggaacgtaaagacaaagcgcctgaaggacaaaagcgtgtagaacttcacgcacataca
tctatgagtcagatggatgctgttgtttccgcatcagcattagtcgcacaggcggcaaaa
tggggacatcctgccatcgcgattactgatcatgcaaacgtacagtcatttccggaagct
tataatgcagggaaaaagcacggcatcaaagtgctcttcggtttagaggccaacctggtg
gatgacggcgtgccgattgtttatgaggaacagcaccgtctgctcgaaaccgatacgtac
gtagtatttgatgtcgagacaacaggattatccgctgtctacgacacgattattgagctc
gcggctgtaagggtgaaagatggagaaattatcgatcgattcgaacgtttcgctaatcct
catcatccgttgtcttctgttacgactaacctgacgggcattacggatgatatggtggaa
aatgcgcccgaagttgaagaagtcatggcagaatttatcgattttatcggtgatgcggtc
ctgattgcccataatgcctcatttgacatgggcttcttttatgcttcgtgtaagcgtgcc
aagattgaaacaatcgcttacccggtcattgatacattggaactttcccgcttcctttat
cctgaactgcgtaaccaccgtttaaatacgttagctaagaaattcgatatcgaattaact
cagcatcaccgtgcgatatacgacacggaagctacagctcatttatttttacgactgctg
gcagatacaaaggaaagaggaattgaatggctggacgacctcaataaaaacattggggaa
ggggatgcatataaacgttcacgtccttcccactgcaccatactcgctgcggatgatgaa
ggcctgaaaaacttattcaaacttgtctccatttcacatatggattacttttatcgtgtg
ccgcgtatcccccgatcattgctcgttaagtaccgcaaagggctgctgataggatcgggt
tgtgataaaggcgaagtattcgaaggattgatgcagaagccgatggaggaagtggaagaa
atcgcaagtttttatgactacttggagcttcatccgaaaccggtctattctcatttgatg
gaactggatctgatccgggatgaatggaatctggaagatattatgcgcaagatgctgaaa
ctcggcaagaagacaggactgcctgtttgtgcaacagggaatgtgcattatcttgaagaa
acggatgcgacctaccgtaaagttctcgtgcgctctcaaggcggtgccaacccgatgaac
cggcactctttaccggctgtccatttccgtacgacggatgagatgctcaaagagttcgag
tttttaggagaggaagcagccaaagaaattgtgatcgataatccgttgaaaatcgtcgaa
cgtgttggcgatgtgaaaccgatcaaggatgatctgtatacgccgaaaattgaaggcgca
gaagaagaagtccgtgagctgacatattctatggcccgtcatatctacggcgacacgctg
cctgaaattattgaagcacgaattattaaagagctgacttctattattgacaacggtttt
gcggtaatttatctcatttcacataaactggtgaagaagtctttggatgacggctatctt
gtaggttcgcgcggatctgtaggctcgtcattcgttgcaactatgatggaaatcactgaa
gtgaatccaatgccgccgcattacgtatgtccatcttgtaagcacagtgaattctttgat
gacgggtctgtgggctcagggtatgatttacctgacaaagcatgtccggcatgcggaacg
atgttcaaaaaagatgggcaggatataccctttgaaacgttccttggattcgcgggggat
aaagtgcctgatatcgatctgaacttcagtggtgaatatcaggcgcacgcccataactac
acaaaggaattgtttggagaagattatgttttccgtgcgggaacgattggtactgtcgct
gaaaaaacagcatatggctatgtgcggggctacatgaatgataatgacattcaaatgcgc
ggggcggaaattgacaggctggtgcagggctgctcgggtgtcaaacggaataccggacag
caccccggaggaatcattgttgttccggacacgatggatatttttgactttacgcctgtt
caattcccagcggatgacattcaatccaagtggcggacaacgcactttgatttccactct
atcgacaataacctgttgaagctggacatactcgggcatgatgacccgacgatgatcaaa
atgctggaagacttatcaggcatcgatgctaagacgattccgcctgatgacgaaggggtc
atggcgctgtttggcggaactgagtctcttggtgtgactgaagaacagatcgactgtaaa
accggaacgctaggcgtacccgaatttggtactcggtttgtccgtcaaatgcttgaagaa
actaagccttccacgttctctgagttaatccagatttccgggctgtctcacggtacggat
gtatggctcggtaatgcgcaagagctgatccaaaataaaacatgccagttgtcagaagta
atcggctgtcgtgacgatattatggtctacctgatctatcagggactggaaccgtctctt
gcatttaaaattatggaatctgtgcgtaaagggaaagggctgacgccggagtttgaagaa
gcgatgaaagagaataaagtgccggcttggtatatcagctcgtgcaagaaaatcaagtac
atgttcccgaaagcacacgccgctgcgtatgtactgatggctctcagaatcgcctacttt
aaagtgcatcatccaattatgtattacgcaacatatttcacagtgcgtgcaacagacttt
gatttggtgacaatgtccaagggctccgcatcgatccgggcgaaaatcaaagaaataaat
gccaaagggctggacgcgccgccgaaagaaaagaacttagtcgtcgtacttgaaattgcg
cttgaaatggtcgaacggggctttacgatggcaaagcctgatctgtataaatccgacgcc
acacaattccttattgaagggaataaactgattccgccgtttaacgcagttccttcatta
ggtacgaacgtcgccaagacaattgtcgaagcacgaaaagacggagagtttttatcgaaa
gaggacttccagaagagaggccgtgtatcgaagacgattgtagaatacttggataatctc
ggatgcctggaagggatgccggaagcaaaccaattatccctgttctga
DBGET
integrated database retrieval system
