KEGG   Sporosarcina sp. P33: SporoP33_14675
Entry
SporoP33_14675    CDS       T04790                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
spor  Sporosarcina sp. P33
Pathway
spor02024  Quorum sensing
spor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SporoP33_14675
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SporoP33_14675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spor03019]
    SporoP33_14675
   03036 Chromosome and associated proteins [BR:spor03036]
    SporoP33_14675
Messenger RNA biogenesis [BR:spor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SporoP33_14675
Chromosome and associated proteins [BR:spor03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SporoP33_14675
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: ARD49371
LinkDB
Position
3028740..3028964
AA seq 74 aa
MAQGNMQDTFLNSLRKNNTFVTIFLLNGFQLKGLIKSYDNYTVLLESEGKQQLIYKHAIS
TYAPSKPVILKDEQ
NT seq 225 nt   +upstreamnt  +downstreamnt
atggcacaaggaaacatgcaagatacttttttaaattcattacgcaagaacaacacattt
gtaacaatctttttactcaatggttttcagttgaaaggtctgatcaagtcatatgacaat
tatacggtcctgctggaatcagaaggcaaacagcagctgatctataaacatgcgatctca
acttatgctccttcaaaaccagttatcttaaaagatgaacaataa

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