Sporosarcina sp. PTS2304: DV702_10170
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Entry
DV702_10170 CDS
T05572
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spos
Sporosarcina sp. PTS2304
Brite
KEGG Orthology (KO) [BR:
spos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spos03009
]
DV702_10170
Enzymes [BR:
spos01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DV702_10170
Ribosome biogenesis [BR:
spos03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DV702_10170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
MTS
PrmA
Cons_hypoth95
Methyltransf_15
RrnaAD
Methyltransf_11
Methyltransf_12
TPMT
N6_N4_Mtase
TRM
N6_Mtase
Methyltransf_23
DUF503
Motif
Other DBs
NCBI-ProteinID:
AXI00050
UniProt:
A0A345NYE1
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Position
complement(2118742..2120106)
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AA seq
454 aa
AA seq
DB search
MSFAVNKNDKLQVCIEDVTHDGAGVAKVDGYPLFIPGTLPGETVHVHVQKTLKNYGFAKL
IDIVEPSNARVTPPCHVFPTCGGCQMQHLSYEAQLLQKRKSVRNVIDRIAKLPHVPVHEV
KGMDDPWRYRNKSQIPFDTVNDRVITGFYKTRTHQIVDTDVCLNQTTEADEVMTLLKYKL
QQLGIETYDEKTHKGMLRHVIIRKARQTDQVMVVLVTRHKKFPQKQAVVDLILQQVPNVT
SIMQNINTANTNVIMGNETVTLHGSDVIIDRIGDTEFEISARSFYQINPVQTEVLYKQAL
DYANLTGNETVIDAYCGIGTISLFLAKQAKEVYGVEIVPQAIEDAKRNAQLNGITNAHFE
AGPAEEVIPKWYATGKRFDVLVVDPPRKGCDEKLLETILKYKPEKVVYVSCNPGTLARDL
RVLEDGGYRTKEVQPVDMFPHSSHVECVALIELK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcagtaaataaaaatgacaaattacaagtttgtatagaagatgtaacacat
gacggcgcgggcgttgcgaaagtcgatggctaccctttgttcatccccggcacattacca
ggagaaactgttcatgtccatgtgcagaaaacattgaaaaactatggctttgctaaattg
atagatatcgtagaaccatccaatgcacgcgtgacacccccttgccacgtatttccgaca
tgtggcggctgtcaaatgcaacatttatcatacgaagcgcaactgcttcaaaaaagaaaa
tccgtacgcaatgtgatcgatcgcatcgcaaaattgccgcacgttcctgtccatgaagta
aaaggaatggacgatccgtggcgctaccgcaataaatcccaaatcccatttgacaccgta
aatgatcgcgtcattaccggattttataaaacacgtacacaccaaattgtagacacagac
gtttgcttaaaccaaacgacagaagcagatgaagtgatgacactgctaaaatataagctg
cagcaactaggtattgaaacgtacgatgaaaaaacgcataaaggaatgcttcgccatgtc
attataagaaaagcccgtcaaacggatcaagtcatggtcgtactcgtcacacgccataaa
aagtttccacaaaaacaggcagtagtagacttgattttgcaacaagttccgaacgtcacg
tccattatgcaaaatattaacacagccaacacaaatgtcattatgggcaacgaaacagta
acgttacatggctcagacgtcatcattgaccgaattggcgacacagaattcgaaatttct
gcccgctctttttatcaaatcaatcccgttcaaacagaagtgctgtataagcaggcactc
gattacgcaaaccttacaggaaatgaaacagtgatcgacgcctactgcggaatcggcaca
atctcactgtttttggccaagcaagctaaagaagtatacggcgtagaaatcgttccgcaa
gcaattgaagacgcgaaacgcaatgcacagttaaacggcattacaaatgcgcattttgaa
gcaggcccagcagaagaagttatcccgaagtggtacgcaaccggtaaacggtttgatgta
ttagtcgtcgatccgccgcgcaaaggctgcgacgagaagttgctagagacgattttgaaa
tacaagccagagaaagtcgtttatgtttcttgtaatccagggacactcgcacgggatttg
cgggtgttggaggatggcgggtaccggacgaaggaagtgcaaccggtggatatgtttccg
catagtagtcatgtggagtgcgtggcgttgatagagttaaaatag
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