KEGG   Sulfitobacter pontiacus: G6548_04940
Entry
G6548_04940       CDS       T06732                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spot  Sulfitobacter pontiacus
Pathway
spot03030  DNA replication
spot03430  Mismatch repair
spot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G6548_04940
   03430 Mismatch repair
    G6548_04940
   03440 Homologous recombination
    G6548_04940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spot03032]
    G6548_04940
   03400 DNA repair and recombination proteins [BR:spot03400]
    G6548_04940
Enzymes [BR:spot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G6548_04940
DNA replication proteins [BR:spot03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G6548_04940
DNA repair and recombination proteins [BR:spot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G6548_04940
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QLL43784
LinkDB
Position
1025689..1026255
AA seq 188 aa
MLPLPVGYFQFIALDVETACGDSASICQIGIACVGFDDSILTWSTYVDPLMPFAPFNVDL
HGIGPETVRGAGSFAQVWPQIWPLLSRHPMVQHSRFDEYAINAACKAQGLPRPRLTWHDS
VTIARRAWPELKGNGGHGLANLKQVLNLDFHHHDAGEDARAAAMVVLRAQATTKDHRLFK
PVQLSLPL
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctgcctctgcccgtgggttatttccagttcattgcactggatgtcgaaaccgcctgt
ggtgacagcgccagtatttgccagatcgggatcgcctgcgttggctttgatgacagcatt
cttacatggtctacctatgtcgacccgcttatgccgttcgcgcccttcaatgttgacctg
cacgggattgggccggagactgtgcgcggcgccggaagctttgcgcaggtctggccccaa
atctggccgttgctgtcacgccacccgatggtgcagcacagcaggttcgatgaatatgcg
atcaacgccgcgtgcaaagcgcagggccttccgcgaccacgtctgacatggcacgacagc
gtgaccatcgcgcgcagggcttggcccgaattgaagggcaacggcggccacggtctggcc
aacctgaaacaggtgctgaaccttgactttcaccaccatgacgcaggcgaagacgcccgc
gccgctgcgatggtggttctgcgggcgcaggccacgaccaaagaccaccggctgttcaaa
cccgtgcagctgtcactgcctttgtaa

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