Sulfitobacter pontiacus: G6548_05850
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Entry
G6548_05850 CDS
T06732
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spot
Sulfitobacter pontiacus
Pathway
spot03030
DNA replication
spot03430
Mismatch repair
spot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G6548_05850 (dnaE)
03430 Mismatch repair
G6548_05850 (dnaE)
03440 Homologous recombination
G6548_05850 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spot03032
]
G6548_05850 (dnaE)
03400 DNA repair and recombination proteins [BR:
spot03400
]
G6548_05850 (dnaE)
Enzymes [BR:
spot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G6548_05850 (dnaE)
DNA replication proteins [BR:
spot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G6548_05850 (dnaE)
DNA repair and recombination proteins [BR:
spot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G6548_05850 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QLL42076
LinkDB
All DBs
Position
1221174..1224707
Genome browser
AA seq
1177 aa
AA seq
DB search
MAQAPRFIHLRTHSEYSLLEGALRLKKLPDLCKGADMPALALTDTNNMFAALEFSVAMAG
AGVQPIIGCQVDLAYVKVQPGEKPRDPAPVVLLAQSEAGYENLMKLNSCLYIDKGGALPQ
VTLEELEALNGGLICLTGGAGGPVGQLLQGGQRPAAEALMARLHGAFADRLYIELQRHPG
EDGQPVAEQLTERGFVEMAYDMGIPLVATNDVYFPKADMYEAHDALICIADGAYVDQQHE
RRRLTAQHYFKSQAEMVTLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEIEELK
RQAHEGLKNRLKVIPHATTVEEYEKRLDFELGIIEGMGFPGYFLIVADFIKWAKDNNIPV
GPGRGSGAGSLVAYALTITDLDPLRYQLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QRKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALA
DEPRLREEAKNEEVVARLLNYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDQIKSSGRHLHVAADGTELFEPPEGLI
DDIATIPLDDEASYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGQRERESVHPSIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFEKGAMANGVDKKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKRLELPWVPPCVNRSDATFKVVEGA
LVYALGALKNVGVEAMKLITEGRKVDGVDKPFATLFDLARRVDLKRVGKRPLEMLARSGA
FDQLDNNRRRVWQSLDGLVSYSAAIHEQKASNQVSLFGEAGDDLPEPRIVPCDDWEAAER
LTEEFKAVGFYLSGHPLDDYMGPMKRKSATGGVPFLTLDELTEKVSVKGAMNARLAGIVA
GRQERKSARGNRFAFAQLSDPTGAYEVTLFSDTLELARDHLETGSKVVVMVEATMESDQL
KLLGRSVVPIDTVVEDAGNMGLRIFVDDAGAIQAVADVLAGARSAARSAGKGPVQLCLMD
PTLPGEVEVDLCAEYPVTPKIKGAIRSLTGVMEVEEI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcaccccgattcattcacctgcgcacgcactccgagtattcgttgttggaa
ggggcgttgcggctgaaaaagctgcctgatctgtgcaagggggccgatatgccggcgctg
gccctgacggataccaacaacatgttcgccgcgttggaattctcggtcgccatggcgggg
gccggtgtgcaaccgatcatcggctgtcaggtggatctggcctatgtgaaggtgcaaccg
ggggaaaagccgcgcgatccggcccctgtggttttgctggcccaatccgaggccgggtat
gaaaacctgatgaagctgaactcctgcctttatatcgacaagggcggggcgttgccgcag
gtcaccttggaggagctggaggcgctgaacggtgggctgatctgtctgacaggcggggca
ggcggccccgtggggcagctgttgcagggcggtcaacgccccgcggcagaggcattgatg
gcaaggctgcacggggcttttgccgaccggctttatatcgagttgcagcgccaccccggc
gaggatggccagcctgtggcggagcagctgaccgaacggggctttgtcgagatggcctat
gacatgggcatccctttggtcgcgacgaatgatgtctatttccccaaggccgatatgtac
gaggcccatgacgcgctgatctgtatcgcggatggggcctatgtcgatcagcagcacgaa
cgccgccggctgaccgcgcagcattacttcaaatcgcaggccgagatggtgacgctgttt
gccgatctgcccgaagccatcgagaacacggtcgagatcgccaagcgctgtgcctttatg
gcctatcgccgtgatccgatcctgccgaagtttgcggatgacgagatcgaagagctcaag
cggcaggcgcatgaggggctcaaaaaccggctcaaggtgatcccccatgccaccaccgtc
gaagaatatgaaaagcggctggatttcgagctgggcatcattgagggcatggggttcccc
ggctactttctgatcgttgccgattttatcaaatgggccaaggacaataatattcccgtc
gggccggggcggggctcgggcgcggggagcctcgtggcctatgcgctgacgattaccgat
ctggacccgctgcgctatcaactgctgtttgaacggttcctgaaccccgagcgggtctcg
atgcccgactttgacatcgacttttgcatggatcgccgggaagaggtgatccagtatgtg
cagcgcaaatacgggcgcgacaaggtggggcagatcatcaccttcggggcgcttttatcc
aaggcggcggtgcgtgacatcgggcgggtcttgcagatgccttacgggcaggtggatcgt
ctatccaagatgatccctgtcgagggcgtgaaacctgtcagcatcgaaaaggcgctggcg
gatgaaccacgcctgcgggaggaggccaagaacgaggaagtcgtcgcgcggctgttgaac
tatggccagcaggtcgaggggctgttgcgcaacgcatcgacccacgcggcgggggttgtg
atcggggaccggccgctggacgcgctggtgccgctgtatcaggatccacgctccgatatg
cccgcgacgcagttcaacatgaaatgggtcgaacaggcgggtctggtcaagttcgacttt
ctgggcctcaagaccctgaccgtcatccagaacgcggtcgaccagatcaaatcctcgggc
cgtcacctgcatgtggccgccgacgggacagagctgttcgagccgcccgaggggctgatc
gacgatatcgccaccatcccgttggacgacgaggcatcttacaagctttatgccagcgcc
aagacagtggcggtgttccaggtggaatccagcggcatgatggatgcgctcaaacggatg
aagccgacctgtatcgaagacatcgtcgccttggtcgcgctgtaccggcccggcccgatg
gagaatattccggtctattgcgaggtcaagaacggccagcgcgaacgggaatccgtgcat
ccgtcgattgaccacatcctggaggaaacgcagggcatcatcgtctaccaggaacaggtt
atgcagatcgcgcaggtcatggcgggctatagccttggcggcgctgacctgctgcgccgt
gcgatgggtaaaaagatcgccgaggaaatggccaaggaacgccccaagttcgaaaaaggc
gcgatggccaacggggtcgacaagaaaaaggcgtctgaggttttcgaccttctggaaaaa
ttcgccaactacggtttcaacaaatcccacgccgccgcctatgcggtggtcagctatcag
accgcatggctcaaggcgaaccatccggtcgaattcatggccggcgtgatgaactgtgat
atccatctgaccgacaagctggcggtctatttcgaagaggtccgcaaacggctggaactg
ccctgggtgccgccttgtgtgaaccgcagtgatgcgacgttcaaggtggtcgagggcgcg
ttggtctatgctttgggcgcgctgaaaaacgtcggggtggaagccatgaagctgatcacc
gaaggccgcaaggtggacggtgtggacaagccctttgccacgctttttgatctggcgcgg
cgggttgatctgaaacgggtgggaaaacgtccgcttgagatgctggcccggtccggtgcg
ttcgaccagctggacaacaaccgccgccgcgtctggcagtcgctggacggtttggtcagc
tattccgccgcaatccacgagcagaaagcctctaatcaggtgtcgctgtttggcgaggcg
ggggatgacttgccagagccgcgcatcgtgccttgcgacgattgggaggccgccgagcgc
ctgaccgaagagttcaaggccgtaggcttctatctgtcgggccacccgctggacgattac
atggggccgatgaaacgcaaatccgctacgggcggtgtgccgttcctgacgctggacgag
ctgaccgagaaagtctcggtcaaaggggcgatgaacgcccgtctggcagggatcgtcgcc
ggacggcaggaacgcaaatcggcgcgcggcaatcgctttgcttttgcgcaactgtcggac
ccgacgggcgcttacgaggtgacgctgttttcggacacgctggaactggcgcgcgaccac
cttgaaacagggtcgaaggtcgtggtcatggtcgaggcgacgatggaaagcgaccagttg
aaactgctgggccggtcggtggtgccgatcgacacggtggtcgaggatgcgggcaatatg
gggctgcggatctttgtggatgatgcgggggctattcaggcagtcgccgatgtgctggcc
ggtgcccgatccgcggcacgcagcgcgggtaagggtccggtgcaactgtgcctgatggac
ccgaccctgcccggcgaggtggaggttgacctctgcgccgaataccctgtcacccccaag
atcaagggtgccatccggtccctgactggcgtgatggaggtagaggaaatctga
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