Sulfitobacter pontiacus: G6548_10330
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Entry
G6548_10330 CDS
T06732
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spot
Sulfitobacter pontiacus
Brite
KEGG Orthology (KO) [BR:
spot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spot03016
]
G6548_10330 (rnd)
Enzymes [BR:
spot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G6548_10330 (rnd)
Transfer RNA biogenesis [BR:
spot03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G6548_10330 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QLL42908
LinkDB
All DBs
Position
complement(2125305..2126462)
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AA seq
385 aa
AA seq
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MKTITTTAELEAYCTEAAKHDYVTVDTEFLRERTYYSKLCLIQLAMPGTDDSNAVLVDPL
SEGLSLDPLYTLFRDTSVVKVFHAARQDLEIFYVDAGVFPEPLFDTQVAAMVCGFGEQVG
YETLVRKIAHQPLDKTSRFTDWSRRPLSDAQAKYALADVTHLRQIYEFLARKLEQTGRAR
WVQEELEILTSPDTYVTPPREAWRRVKTRTNSPKFLALVRELAAFREEYAQTRNIPRSRV
YKDDAMVELASNKPKNHEELGRARLLLREARKGEIADGILKAVAAGVNCPPGDMPQPDRS
RDKLQVNPALSDLLRVLLKAKSESAGVAAKLIAPAADLDGIAAGLRDVAALKGWRREVFG
EDALRLCNGEIALTAVGSDLKVVEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatcaccaccaccgccgagcttgaagcctactgcacagaggccgccaagcat
gattacgtgaccgtcgataccgagtttctgcgcgaacggacctattattccaagctctgt
ctgatccagttggcgatgcccggaaccgacgatagcaatgccgttctggtggacccgctg
agcgaggggctgtcgcttgacccgctgtacacgctgttccgtgatacgtcggtggtcaaa
gtcttccacgccgcgcggcaggatctagagattttctatgtcgatgcgggcgtctttccc
gaacccttgttcgacacacaggtcgcggcgatggtctgtggctttggcgaacaggtggga
tatgaaactctggtgcgcaagatcgcccatcaacctcttgataagacgtcccgttttacc
gactggtcgcgccgcccgctgagcgatgcgcaggcgaaatacgcgctggccgatgtcacg
cacctgcgccagatctacgaattccttgcacgtaagcttgaacagacgggccgcgcccgc
tgggttcaggaggagcttgagatcctgaccagccctgacacctatgtcaccccgccgcgc
gaggcatggcgtcgggtcaagacgcgcacgaattcgccaaagttcctggcgctggtgcgc
gaactggccgccttccgcgaggagtacgcccagacccgcaacatcccgcgcagccgcgtc
tataaggatgacgcgatggtagagttggccagcaacaaaccgaaaaaccacgaggaactg
ggccgtgcccgtctgcttctgcgcgaggcccgcaagggcgagatcgcggatggtatcctc
aaggcggtggccgctggcgtgaattgcccgcccggcgatatgccgcagcctgatcgcagt
cgcgacaagcttcaggtcaatccggcgctgtccgatctgctgcgtgtcttgctgaaggcc
aagtccgaaagcgcaggcgttgcggccaagctgatcgcccccgctgcggaccttgacggg
atcgccgcagggctgcgtgatgtggccgcacttaaagggtggcgacgcgaggtattcggg
gaagatgcgctgcgactgtgcaacggcgagatcgctttgaccgcggtcgggtccgatctg
aaagtggttgagctttaa
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