Sulfitobacter pontiacus: G6548_13835
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Entry
G6548_13835 CDS
T06732
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spot
Sulfitobacter pontiacus
Pathway
spot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G6548_13835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spot03021
]
G6548_13835
03400 DNA repair and recombination proteins [BR:
spot03400
]
G6548_13835
Enzymes [BR:
spot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G6548_13835
Transcription machinery [BR:
spot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G6548_13835
DNA repair and recombination proteins [BR:
spot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G6548_13835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QLL43561
LinkDB
All DBs
Position
complement(2846090..2847106)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVIAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNRDHVICHLDDNADVYMELTVNTGKGYVAADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSISPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaaaaattgggctgaattgatcaagccacagcagttggacgtcaagccgggc
aatgaccctgcacgtcaggctactgtcatcgccgagccgctggagcgtggctttggtttg
acaatgggcaacgcgctgcgccgcgttctgatgtcgtcgctgcaaggtgctgccatcaca
tctgtacaaattgataatgttttgcacgaattttcgagcgttgcgggtgttcgcgaagat
gtcaccgacatcgttctgaacctcaaaggcgtttccctgcgcatggaagtcgaagggccc
aagcgcctgtcgatttctgccaagggaccgggtgttgtcacagctggtgacatctccgaa
agcgctggtatcgaaattctgaaccgtgatcacgtgatctgccacctggatgacaacgct
gacgtttacatggaactgacggtcaacaccggcaagggctatgtggcggcagacaagaac
aagccagaagatgcgcctatcggtcttatcccgatcgacgcgatctattcgccggtcaag
aaagtgtcctatgacgtgcagccgacccgcgaaggtcaggtgctggattatgacaagctg
acgatgaaagtcgaaacagacggctccatctctcctgacgatgccgtggcctttgctgcg
cgtattctgcaggatcagctgggcatcttcgtcaacttcgacgagcctgaatccgcatcg
cgtcaggacgacgacgacggtctggaattcaacccgctgctgctgaagaaggtagacgag
ctggaactgtccgtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggc
gatctgatccagaagaccgaagccgaaatgctgcgcacgccgaactttggccgcaaatcc
ttgaacgagatcaaggaagtgctgtcgggcatgggcctgcaccttggtatggacgtcgag
gactggccaccagacaacatcgaagacctcgcgaaaaagttcgaggattcgttctaa
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