Spiroplasma poulsonii: MNU24_01215
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Entry
MNU24_01215 CDS
T09018
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spou
Spiroplasma poulsonii
Pathway
spou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNU24_01215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spou03019
]
MNU24_01215
03009 Ribosome biogenesis [BR:
spou03009
]
MNU24_01215
Enzymes [BR:
spou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MNU24_01215
Messenger RNA biogenesis [BR:
spou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MNU24_01215
Ribosome biogenesis [BR:
spou03009
]
Prokaryotic type
rRNA helicases
MNU24_01215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
XanC_C
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
UNF62112
LinkDB
All DBs
Position
complement(214874..216193)
Genome browser
AA seq
439 aa
AA seq
DB search
MNFNTLNLSPALERMITKMGYTNLTEIQEKAIPVVLNNQDIIGKSHTGTGKTAAFLLPIL
QRLDPQLKRPQAIILCPTRELAMQVIDQVRKFATYLEGVNATLLCGGSHLQRQIYSLRKS
NIVVGTPGRIADHINRNTLRLNTIKTIVLDEADEMLKMGFKTELDKVFENAPKKYQTLLF
SATMPKQVLEIANKYQNNPVEIVVTKNATEQNNITQYYVDAISYRKEDVIIALYKNLQPK
RSIIFSNTKAFTDKIAKMLATIGITSCVINGDKRQRERLQAMRSFREGKATVLVATDVAA
RGIDIDQIDYVFNYDIPTERESYIHRIGRTARAGATGVAVTIVSNRNDLNEIKHLAQYQK
KKIELFDITGYDLKEKTKESKNFGGNYKQADSKQKNNNSKYHNSYKTDRGNFNKSNAPQF
GKNNKRKNKKFSKNKSKFN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatacactaaatttatccccagctttagaacgaatgattactaagatggga
tataccaatttaacggaaatccaagagaaagctattccagttgtattaaataatcaagat
attattgggaagagtcataccggaactggtaaaacagcagcttttcttttaccaattttg
caaagactagacccacaattaaaacggccacaagctattattttatgtccaacaagagaa
ttggcaatgcaagtaattgatcaggttcgaaaatttgcaacttatttagaaggggttaat
gcaacattattatgtggtggttctcatttacaacgtcaaatttattcattacgaaaaagt
aacattgttgttggaacaccaggacgaattgctgatcatattaaccgtaatacattacga
ttgaacacaattaaaacaattgttttagatgaagcagatgaaatgctaaaaatgggtttt
aaaaccgaacttgataaggtatttgagaatgctcctaaaaaatatcaaacattattattt
tcagcaacaatgccaaaacaagtgctagaaattgctaataaatatcaaaataatcctgtt
gaaattgttgtaacaaaaaatgctaccgaacaaaataatattacccagtattatgttgat
gcaatttcttatcgtaaagaagatgtgataattgctttatataagaatttacaaccaaaa
cgaagcattattttttctaatacaaaagcttttactgataaaattgctaaaatgcttgca
acaattggaattactagttgcgttattaacggtgataagcgccaacgtgaacgattgcaa
gcaatgcgatcatttcgagaaggaaaagcaacggtattagttgcaactgatgttgctgcc
cggggaattgatattgatcaaattgattatgtttttaattatgatattccaacagaacga
gaaagttatattcaccgcattggtcgcacagcccgcgcaggtgcgacaggtgtggcagta
acgattgtttctaatcgcaatgatttaaatgaaattaaacatttagcacaatatcaaaag
aaaaaaattgaactatttgatattactggctatgatttaaaagaaaaaacaaaagaatca
aaaaattttggtgggaattacaaacaggcagattctaaacaaaaaaataataatagtaaa
tatcataattcttataaaactgatcgtggtaactttaataagagtaatgccccacaattt
ggaaaaaataacaaaagaaaaaataagaaattttcaaaaaacaaatcaaaatttaactaa
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