Sphingobium phenoxybenzoativorans: KFK14_06270
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Entry
KFK14_06270 CDS
T07582
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spph
Sphingobium phenoxybenzoativorans
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spph03016
]
KFK14_06270 (truB)
Enzymes [BR:
spph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KFK14_06270 (truB)
Transfer RNA biogenesis [BR:
spph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KFK14_06270 (truB)
Prokaryotic type
KFK14_06270 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QUT07028
UniProt:
A0A975K900
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All DBs
Position
1291720..1292619
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AA seq
299 aa
AA seq
DB search
MHGWIILDKPHGLGSTQAVGAVKRALREAGAGKAKVGHGGTLDPLATGVLPVAIGEATKL
AGRMLDSDKIYDFTIAFGTQTDTLDLEGAVIAESDVRPTLAEVEAILPRFTGAIEQAPPA
YSAIKVDGQRAYDLARAGQDVEMKLRAVTIHALTPVRFEPAKDETLSSVTLTAHVSKGTY
IRSLARDIASALGTVGHVTMLRRVKAGPFTLDQAISLDNLRDAARERAIAQLMLPLTAGL
DDIPALSVTPQEAQALRQGRTLVGKPCTQGLLLATEGETPVALVEASGPEIRVVRGFNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgacaaaccccatggccttggttcgacacaggccgtcggc
gcggtgaagcgcgctttgcgggaggcgggcgcgggtaaggcgaaggtcggacatggcggg
acgctggacccgctggcgacaggcgtgctgccggtcgcgatcggcgaggcgacgaagctc
gccgggcggatgctggacagcgacaagatatatgatttcaccatcgccttcggtacgcag
acggacacgctcgacctggaaggggccgtgattgcggagagcgatgtgcggcccacgctg
gcggaggtggaggctatattgcctcgctttactggcgcgatagagcaggctcctcccgcc
tattccgctatcaaggtcgatggccagcgcgcctatgatctggcgcgcgccgggcaggat
gtggagatgaaattgcgggccgtgaccattcacgcactcactcccgttcggttcgagcct
gccaaggatgaaacgctgtcgtcggtcaccctgaccgcccatgtgtccaagggaacctat
atccgctctcttgcgcgcgacatcgcatcggcgctcggcaccgtcgggcatgtgaccatg
cttcgccgcgtgaaggcggggccgttcacgctggatcaggcgatttctctggacaatttg
cgcgatgctgctagggagcgcgccatcgcgcagcttatgctgccgttgacggcggggctg
gacgacatcccggctctctccgtcactccccaagaggcacaggcgctccgtcagggacgt
actctcgtggggaaaccctgcacgcagggcctcctgctggcgacggaaggcgaaacgccg
gtcgcgctggtcgaggcttccggcccggaaatccgggtggtgcggggctttaatctctag
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