Sphingobium phenoxybenzoativorans: KFK14_06280
Help
Entry
KFK14_06280 CDS
T07582
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFK14_06280 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spph03019
]
KFK14_06280 (pnp)
03016 Transfer RNA biogenesis [BR:
spph03016
]
KFK14_06280 (pnp)
Enzymes [BR:
spph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KFK14_06280 (pnp)
Messenger RNA biogenesis [BR:
spph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KFK14_06280 (pnp)
Transfer RNA biogenesis [BR:
spph03016
]
Prokaryotic type
tRNA degradation factors
KFK14_06280 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Phage_holin_7_1
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QUT07030
UniProt:
A0A975Q2H8
LinkDB
All DBs
Position
1293199..1295502
Genome browser
AA seq
767 aa
AA seq
DB search
MFDVKKVSIELGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPVRPLFPEGFYNEINVIAQVLSF
DGESEPDIVAMIAASAALTISGVPFMGPIGAARIGYKDGEYSLNPSLDEVKEGELDLVVA
ATHDAVMMVESEAKELSEEVMLGAVGFAHDACKKVVEAIIKLAEKAAKEPWEMAAQADLS
AAKDKLKKLIGKDIAAAYKLTDKSARSNALNAARAKAKEAFADATPQDQMAAQKLGKKLE
AEIVRGAILKDGSRIDGRTTTQIRPIEAMVGFLPRTHGSALFTRGETQSICTTTLGTKDA
EQMIDGLTGLHYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPTKDEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKEFAILSDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKVAGITEEIMRVALNQAKEGRAHILGEMAKAL
DHTRTELSAHAPRIETLQIDKSKIREVIGTGGKVIREIVAETGAKVDIDDEGLIKISSSD
INQIEAAKKWILGIVEEAEVGKIYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMRNERVEK
PTDVLSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGEELEDTRPPREPREPRGDRGPRRE
GGDRGDRGPRRDRGRDGGRDRGPRRERSEGKDDGGDAGLPSFITQED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtaaagaaagtctccatcgagctgggcggaaagaccctcacgctcgaaacc
ggtcgtattgcccgtcaggccgacggtgctgtgctggccacctatggcgagaccgtggtg
ctgtgcgccgtgaccgccgccaagtcagtgaaggaagggcaggacttcttcccgctgacc
gtccactatcaggaaaaatattcggccgccggacgcattccgggcggcttcttcaagcgt
gagcgcggcgcgaccgagaaggagacgctggtctcccgcctgatcgaccgtccggttcgc
ccgctgttcccggaaggcttctacaacgagatcaacgtgatcgcgcaggtcctgtcgttc
gacggcgagtccgagccggacatcgttgcgatgatcgccgcttccgctgcgctgaccatc
tccggcgtgcccttcatgggtccgatcggcgcggcgcgcatcggttacaaggatggcgag
tatagcctgaacccgtcgctggatgaggtgaaggaaggcgaactcgacctggttgtcgca
gccacccatgacgccgtgatgatggttgaatccgaagccaaggagctttcggaggaagtc
atgctgggcgctgtcggcttcgcgcatgacgcatgcaagaaggtcgtcgaggcgatcatc
aagctggctgagaaggccgccaaggagccttgggaaatggccgctcaggctgatctgtcg
gccgccaaggacaagctgaagaagctgatcggcaaggacattgccgccgcttacaagctg
accgacaagtccgcccgttcgaacgccctgaacgccgcccgcgccaaggcgaaggaagcc
tttgccgatgcgacgccgcaggaccagatggccgcgcagaagctcggcaagaagctggaa
gccgaaattgtccgtggcgcgatcctgaaggacggcagccgcatcgacggccgcacgacc
acgcagatccgtccgatcgaggcgatggttggcttcctgccgcgcacccatggttcggcg
ctgttcacccgtggcgagacgcagtcgatctgcaccaccacgctgggcaccaaggacgcc
gagcagatgatcgacggcctgacgggcctgcactatgaaaacttcatgctgcactacaac
ttcccgccctattcggtcggtgaagtcggccgcttcggcgcgccgggccgccgcgaagtc
ggtcatggcaagctggcgtggcgcgcgctgcatccggtgctgccgaccaaggacgagttc
ccttacacgatccgcgtcctgtccgacatcacggagtccaacggatcttcctccatggcg
accgtctgcggcggttcgctgtcgatgatggatgccggtgtgcccctgaagcgtccggtc
tccggcatcgccatgggcctgatcctggaaggcaaggaattcgcgatcctgtccgatatt
ctgggtgatgaagatcatctgggcgacatggacttcaaggtcgccggtacgtccgagggc
atcaccacgatgcagatggacatcaaggtcgccggcatcaccgaggagatcatgcgcgtc
gccctgaaccaggcgaaggaaggccgtgcgcatattctgggcgagatggccaaggcgctg
gatcacacccgcaccgaactgtcggcccatgccccgcgcatcgagacgctgcagatcgac
aagtcgaagatccgcgaagtcatcggcaccggcggcaaggtcatccgggagatcgtcgcg
gaaaccggcgcgaaggtggatatcgacgatgaaggtctgatcaagatcagctcgtccgac
atcaaccagatcgaagccgccaagaagtggattctcggcatcgtcgaggaagcggaagtc
ggcaagatctacaacggcaaggtcgtcaacatcgtcgacttcggcgccttcgtgaacttc
atgggcggcaaggacggcctcgtccacgtttccgagatgcgcaacgagcgcgtcgagaag
ccgaccgacgtcttgtcggaaggccaggaagtgaaggtcaaggtgctggagatcgatccg
cgcggcaaggtgcgtctgtcgatgcgcgttgtcgatcaggaaaccggcgaggagctggag
gacacccgtccgccgcgcgaaccccgcgaaccccgtggtgatcgcggtccgcgccgtgag
ggtggcgaccgtggcgatcgtggcccccgccgcgaccgtggacgtgacggcggtcgcgac
cgtggtccccgccgcgagcgttccgaaggcaaggatgacggtggcgacgccggtctgccg
agcttcatcacgcaggaagattga
DBGET
integrated database retrieval system
